Pairwise Alignments

Query, 335 a.a., DNA-binding transcriptional regulator GalS from Vibrio cholerae E7946 ATCC 55056

Subject, 333 a.a., HTH-type transcriptional regulator GalR from Erwinia tracheiphila SCR3

 Score =  370 bits (950), Expect = e-107
 Identities = 192/330 (58%), Positives = 238/330 (72%)

Query: 1   MATIKDVAREAGVSVATVSRVINKSPKASQASIDTVTSAMHKLGYRPNAAARALVNQSTN 60
           M TIKDVAR AGVSVATVSRVIN SPK S  S   V +AM +L Y PNA ARAL  QST 
Sbjct: 1   MTTIKDVARLAGVSVATVSRVINHSPKVSDISRQAVQTAMEELQYHPNANARALAQQSTE 60

Query: 61  TIGVLVSDVSDPFFGTLVKAVDTVAHREGKHLLIGNGYHRAEEERRALELLINSRCDALV 120
           T+G++V DVSDPFFG LVKAV+ VA+  G  LLIGNGYH  ++E +A+E LI  RCDALV
Sbjct: 61  TMGLVVGDVSDPFFGALVKAVEQVAYETGHFLLIGNGYHTEQKEHQAIEQLIRHRCDALV 120

Query: 121 IHSKALPNEELIEYANEVKTLVLINRHIPQLADRCISLDNQKGAYLATDFLIRQGHRNIA 180
           +H+K +P+E+L+    ++  +VLINR +P    RC++LD+  GA+LAT  LI+QGH+NIA
Sbjct: 121 VHAKKIPDEQLLSLMAQIPGMVLINRSLPGYEQRCVALDDHYGAWLATRHLIQQGHQNIA 180

Query: 181 CISSSHQIEDADQRIAGYQQALNEHGITLSSSYIEKASPDSEGGEQAMTNLLVKSLPFTA 240
            I S+H I DA++R+ GY  AL EH    +   +    PD  GGEQAMT LL +  PF+A
Sbjct: 181 FICSNHPISDAEERLQGYYHALCEHQQPCNDRLVAYGEPDEVGGEQAMTELLGRGKPFSA 240

Query: 241 VVAYNDNMAAGALLVLEENGHSVPEHVSVIGFDDALISRYLRPRLTTVRYPIQLMAEKAT 300
           V  YND+MAAGAL VL +NG  VPE +S+IGFDD L+SRY+RPRLTTVRYPI  MA++A 
Sbjct: 241 VACYNDSMAAGALAVLNDNGVRVPEEMSLIGFDDVLVSRYVRPRLTTVRYPIVTMAQQAA 300

Query: 301 QLALALATDAPRENDPMIFSPTIVRRDSVA 330
            LALALA + PR     +F PT+VRR SVA
Sbjct: 301 LLALALADNQPRPEVTNLFIPTLVRRHSVA 330