Pairwise Alignments

Query, 335 a.a., DNA-binding transcriptional regulator GalS from Vibrio cholerae E7946 ATCC 55056

Subject, 341 a.a., DNA-binding transcriptional regulator CytR from Escherichia coli ECRC62

 Score =  187 bits (476), Expect = 3e-52
 Identities = 105/303 (34%), Positives = 165/303 (54%)

Query: 2   ATIKDVAREAGVSVATVSRVINKSPKASQASIDTVTSAMHKLGYRPNAAARALVNQSTNT 61
           AT+KDVA +A VS ATVSR +    K SQA+ + V  A  ++GY P    R +    + T
Sbjct: 10  ATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRT 69

Query: 62  IGVLVSDVSDPFFGTLVKAVDTVAHREGKHLLIGNGYHRAEEERRALELLINSRCDALVI 121
           I V+V D+ DPFF  +++ ++  A   G  +LIG+  H+ ++E+  ++L+I  + D +++
Sbjct: 70  ILVIVPDICDPFFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLL 129

Query: 122 HSKALPNEELIEYANEVKTLVLINRHIPQLADRCISLDNQKGAYLATDFLIRQGHRNIAC 181
               LP +  IE    +  +V+ N   P+L    + +DN   A+ A ++L  QGH+ I C
Sbjct: 130 LGSRLPFDASIEEQRNLPPMVMANEFAPELELPTVHIDNLTAAFDAVNYLYEQGHKRIGC 189

Query: 182 ISSSHQIEDADQRIAGYQQALNEHGITLSSSYIEKASPDSEGGEQAMTNLLVKSLPFTAV 241
           I+   ++     R+ GY QAL   GI +   YI +     E G +AM  LL    P TAV
Sbjct: 190 IAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLLDLPQPPTAV 249

Query: 242 VAYNDNMAAGALLVLEENGHSVPEHVSVIGFDDALISRYLRPRLTTVRYPIQLMAEKATQ 301
             ++D MA GAL   +  G  VPE +S+IGFD+  ++++  P LTT+  P   +  +A  
Sbjct: 250 FCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAML 309

Query: 302 LAL 304
           L L
Sbjct: 310 LLL 312