Pairwise Alignments

Query, 414 a.a., short-chain dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 393 a.a., putative Membrane protein from Pseudomonas putida KT2440

 Score =  217 bits (553), Expect = 4e-61
 Identities = 149/392 (38%), Positives = 210/392 (53%), Gaps = 23/392 (5%)

Query: 35  AVLRLGFRPFFLLGSIYAVIAILAWVWMFQAGQPQLLQVPALWWHVHEMLFGFAMAIVAG 94
           AV  L FRPFFL GS++A+ A+L W  +             L WH HEMLFGFA AI+AG
Sbjct: 13  AVWSLSFRPFFLGGSLFALTALLLWAGVLAGAPAPAPPGGMLAWHRHEMLFGFAAAIIAG 72

Query: 95  FLLTAVQNWTGITGTKSHRLAGIVALWLMVRILFWLPVPLWLTSSIEALFLLAVAYEVGL 154
           FLLTAVQNW+GI G     L G+  LWL+ R+ +++P+P  L   +E  FL  VA  +  
Sbjct: 73  FLLTAVQNWSGIPGLSGRALQGLFLLWLLGRVSWFMPLPGSLLVLVEGSFLPLVALSLA- 131

Query: 155 RVVKAKGWRNLFFIPLFLLAIAANFASYATIKGMPPFPSSAVWQ-----AMLWWFMLLLS 209
           R V  +  RN + I + +L IAA    + T+ G        +WQ     A LW    +++
Sbjct: 132 RPVLQRRLRNNYPIVVLVLLIAA--CQWLTLAGW--LHQDELWQRRGIFAGLWLVTAMMT 187

Query: 210 VMGGRVIPFFTARRFQFTKAEPILA-LDVIANGSLLALFVLSFFPLTMAQLGQPLMLVAG 268
           V+GGRVIPFFT R      A P    LD      LL++ V   F   +A   Q  + V  
Sbjct: 188 VLGGRVIPFFTRRGLGQLDAAPARPWLDRAC--LLLSVAVPLAFATGLADTPQASLAVLF 245

Query: 269 VA----QLIRFLRWQPWRTFSEPLVWSLHAAYLCIPLSLL-LRGGVSNAWLNHNLL-HLF 322
            A       R + W     +  PL+WSLH AY  + L+ L +    S   LN +L+ H  
Sbjct: 246 FALFALHATRLVLWHDRGLWRVPLLWSLHLAYAWLALACLGMALWHSGVALNPSLVTHAL 305

Query: 323 AIGALSGLVLSMIARVTMGHTGRAIYQGPNMQWAFIALLLAAVVRGVGVGLLPQQLLIWV 382
            +GA++GL+L+M+ARV++GHTGR +    ++ WAF  + LA + R +    LP    + V
Sbjct: 306 TVGAMTGLILAMMARVSLGHTGRPLQVPTSIAWAFALMQLATLARVI----LPLFTSLGV 361

Query: 383 NLSAALWVIAFALFVLRFGAMLLKPRVDGHPG 414
           ++SA  W +A  LF+  +  +LL+PR DG PG
Sbjct: 362 SVSALCWSLALLLFLRHYLPILLRPRADGMPG 393