Pairwise Alignments

Query, 304 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 291 a.a., LysR substrate-binding domain-containing protein from Rhodanobacter sp000427505 FW510-R12

 Score =  188 bits (477), Expect = 1e-52
 Identities = 108/287 (37%), Positives = 171/287 (59%), Gaps = 3/287 (1%)

Query: 4   HISLKQLRVFTTITQHKSLTVAAEVLCLSKAAVSVALSELEKQLGHALFDRVNNRLVLNQ 63
           +IS +QL VF  I    S+  AAE L L++ A S+AL+E+E+QL   LFDR   RL LN 
Sbjct: 3   NISPRQLEVFVQIALAGSVRAAAERLHLTQPAASMALAEMERQLDAPLFDRERGRLHLNA 62

Query: 64  EGQKLLPMADELLQRAKDIDRLFAEQ-QVLTGKLRIGSSDTIGNQVAPYLISAFRQLHPH 122
            G++LLP+A ELL+R  ++ R   E+   LTG+LRIG+S+T+GN +   L+  F   +P 
Sbjct: 63  RGRELLPLAQELLERHAELGRRGREEGAALTGELRIGASNTVGNYLVGELLGGFVHAYPQ 122

Query: 123 PSQSLFISNSAQVCQKLVDYELDIGLIEGKTLHPELISTQFSQDEMCIICAPDHPLAQQE 182
            +  L ++N+  +   ++++ LD+G +EG   HP L    +  D + +   P+HPLA++ 
Sbjct: 123 VAIRLRVANTETIAAAMLEHTLDVGCVEGPVAHPLLEVRPWRDDRLVVCAPPEHPLARRR 182

Query: 183 RLVMSDFEHSDWVLREAGSGSREFFLRVIAPRIEHWIEAFELNTTEALINSVSSGLGLGC 242
            L  +DF  + WVLRE GS +R    RV++ ++       EL+  EA+  +V +GLG+ C
Sbjct: 183 GLKPADFAGARWVLREPGSATRATSERVLS-QLPPGETVLELDQIEAIKQAVVAGLGIAC 241

Query: 243 LSRLAAKTPQQDGRVVILNIP-LDMKRRFWMLVHKEKYQNPLLRQFI 288
           L  +A       GR+  L  P LD++R+  +L+H++KY+  LL  F+
Sbjct: 242 LPAVAVTDALATGRLKALKTPFLDLRRKLSLLLHRQKYRGALLDAFL 288