Pairwise Alignments

Query, 304 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 295 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score =  108 bits (271), Expect = 1e-28
 Identities = 86/289 (29%), Positives = 143/289 (49%), Gaps = 9/289 (3%)

Query: 8   KQLRVFTTITQHKSLTVAAEVLCLSKAAVSVALSELEKQLGHALFDRVNNRLVLNQEGQK 67
           +QL  F T+ +H +++ AA+ L LS+ AVS  L  L++  G  L+ R    + L   G++
Sbjct: 4   EQLITFATVAEHGNISHAAQALHLSQPAVSGQLKLLQEAFGEPLYQRAGRGVRLTAAGEQ 63

Query: 68  LLPMADELLQRAKDIDRLFAEQQVL-TGKLRIGSSDTIGNQVAPYLISAFRQLHPHPSQS 126
           LL  A+ L +  +    L    + L  G +RIG+S T  + + PYLI+ F   +P    S
Sbjct: 64  LLAHAERLRETFRQAQALREAMRGLERGTVRIGASTTPASYLLPYLIADFHGRYPDVLVS 123

Query: 127 LFISNSAQVCQKLVDYELDIGLIEGKTLHPELISTQ---FSQDEMCIICAPDHPLAQQER 183
               N+A++   L    +DI LIEG       + TQ   + +DE+  I    HPLA  ++
Sbjct: 124 TSHGNTAEIVAAL--DSVDIALIEGPPGQELPLGTQVTPWREDEIVAIVPRGHPLAGSDQ 181

Query: 184 LVMSDFEHSDWVLREAGSGSREFFLRVIAPRIEHWIEAFELNTTEALINSVSSGLGLGCL 243
             ++       VLRE+GSG R+   R  A        A E+   E +  +V +G+G+G +
Sbjct: 182 QTLAALGAYPLVLRESGSGVRQIVERAFARDGVAMRVALEIAGVEGVKEAVRAGMGVGFV 241

Query: 244 SRLAAKTPQQDGRVVILNI-PLDMKRRFWMLVHKEKYQNPLLRQFIEFC 291
           S ++ +   +DG +  L + P  + RRF +L+      +    +F+E C
Sbjct: 242 SAMSIR--HEDGALHRLQVAPQALVRRFSILLPHAATPSRAASRFLELC 288