Pairwise Alignments

Query, 304 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 293 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score =  104 bits (260), Expect = 2e-27
 Identities = 77/294 (26%), Positives = 141/294 (47%), Gaps = 12/294 (4%)

Query: 5   ISLKQLRVFTTITQHKSLTVAAEVLCLSKAAVSVALSELEKQLGHALFDRVNNRLVLNQE 64
           ++LK LR    I +  S T AA+ L +++ A+S+A++ LE++LG  LF+R   +++L  E
Sbjct: 1   MNLKALRCCVEIVRQGSFTKAAQHLHIAQPALSMAVTRLEEELGVTLFNRTTRKVILTAE 60

Query: 65  GQKLLPMADELLQRAKDIDR--LFAEQQVLTGKLRIGSSDTIGNQVAPYLISAFRQLHPH 122
           G++ LP     L R  D+ R  L     +  G++R+G     G    P L++AFR+ +P 
Sbjct: 61  GEQFLPRIASAL-REMDVARQELRDMADLKRGEVRLGIPPMFGLHYVPGLMNAFRKSYPG 119

Query: 123 PSQSLFISNSAQVCQKLVDYELDIGLIEGKTLHPELISTQFSQDEMCIICAPDHPLAQQE 182
            + ++F  ++  +  +L   E+D+ L+E + + P+  S     DEM     PDHP A + 
Sbjct: 120 IAMTVFEGSAEDIGHRLEQREIDLALLESRRVPPDKESILLGSDEMLACMHPDHPYAGKA 179

Query: 183 RLVMSDFEHSDWVLREAGSGSREFFLRVIAPRIEHWIEAFELNTTEALINSVSSGLGLGC 242
            L   D  ++D V+ +     R       A     +  A + N    ++ +    +G+  
Sbjct: 180 YLTAEDLRNTDMVVFDRTFVQRHLLDAFFAEHGITYQVALQSNFVSLVVQAALDNMGVAT 239

Query: 243 LSR-LAAKTPQQDGRVVILNIPL--DMKRRFWMLVHKEKYQNPLLRQFIEFCPQ 293
           L R +  +TP       I+ +P     +  F +     +Y +   ++FI+F  Q
Sbjct: 240 LLRSVQQRTPG------IVGVPFRPAQQMSFRLCWRSGEYLSLASKRFIDFAAQ 287