Pairwise Alignments

Query, 304 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score =  219 bits (558), Expect = 6e-62
 Identities = 116/287 (40%), Positives = 176/287 (61%), Gaps = 2/287 (0%)

Query: 6   SLKQLRVFTTITQHKSLTVAAEVLCLSKAAVSVALSELEKQLGHALFDRVNNRLVLNQEG 65
           +L+Q++VF  + QH+S++ AA +L LS++A S +++ELE+Q    LFDR   RL LN  G
Sbjct: 4   TLRQMQVFVAVAQHQSVSRAASLLALSQSAASTSITELERQSSCQLFDRAGKRLALNALG 63

Query: 66  QKLLPMADELLQRAKDIDRLFAEQQVLTGKLRIGSSDTIGNQVAPYLISAFRQLHPHPSQ 125
            +LLP A  LL +AK+I+ L   +    G L +G++ TIGN +A  LI  + Q HP    
Sbjct: 64  HQLLPQAVALLDQAKEIEDLLNGKSGF-GSLAVGATLTIGNYLATLLIGNYMQTHPESQV 122

Query: 126 SLFISNSAQVCQKLVDYELDIGLIEGKTLHPELISTQFSQDEMCIICAPDHPLAQQERLV 185
            L + N+A + Q++  YE+D+GLIEG   HP+L    + +DE+ + CAP HPLA+  R  
Sbjct: 123 KLHVQNTAHIVQQVAHYEIDLGLIEGDCNHPDLEVQPWVEDELVVFCAPQHPLAKLGRAD 182

Query: 186 MSDFEHSDWVLREAGSGSREFFLRVIAPRIEHWIEAFELNTTEALINSVSSGLGLGCLSR 245
           +       W+LRE GSG+R  F + +     +     EL  TEA+  +V SGLG+GC+SR
Sbjct: 183 IESLSQEAWILREQGSGTRLTFDQAMRHHRANLNIRLELEHTEAIKRAVESGLGIGCISR 242

Query: 246 LAAKTPQQDGRVVILNIP-LDMKRRFWMLVHKEKYQNPLLRQFIEFC 291
           LA +   + G +V +  P LD+ R+F+ + HK+KYQ   +R+F+E C
Sbjct: 243 LALRDAFRRGSLVPVETPELDLLRQFYFIWHKQKYQTSAMREFLELC 289