Pairwise Alignments

Query, 304 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 293 a.a., predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

 Score =  199 bits (505), Expect = 8e-56
 Identities = 111/289 (38%), Positives = 175/289 (60%), Gaps = 5/289 (1%)

Query: 4   HISLKQLRVFTTITQHKSLTVAAEVLCLSKAAVSVALSELEKQLGHALFDRVNNRLVLNQ 63
           HI+L+QL VF  + +  S T A+ +L LS++AVS AL++LE QLG  LFDRV  RLV+N+
Sbjct: 2   HITLRQLEVFAEVLKSGSTTQASVMLALSQSAVSAALTDLEGQLGVQLFDRVGKRLVVNE 61

Query: 64  EGQKLLPMADELLQRAKDIDRLFAEQQVLTGKLRIGSSDTIGNQVAPYLISAFRQLHPHP 123
            G+ L P A  LL++A +I++LF E     G +RI +S TIGN + P +I+ +R  +P  
Sbjct: 62  HGRLLYPRALALLEQAVEIEQLFRED---NGAIRIYASSTIGNYILPAVIARYRHDYPQL 118

Query: 124 SQSLFISNSAQVCQKLVDYELDIGLIEGKTLHPELISTQFSQDEMCIICAPDHPLAQQER 183
              L + NS  V Q ++D+ +DIG IEG     E+IS  + +DE+ +  AP  PLA+   
Sbjct: 119 PIELSVGNSQDVMQAVLDFRVDIGFIEGPCHSTEIISEPWLEDELVVFAAPTSPLARGP- 177

Query: 184 LVMSDFEHSDWVLREAGSGSREFFLRVIAPRIEHWIEAFELNTTEALINSVSSGLGLGCL 243
           + +     + W+LRE GSG+RE    ++   +  +  A EL  +EA+ ++V  GLG+ CL
Sbjct: 178 VTLEQLAAAPWILRERGSGTREIVDYLLLSHLPKFEMAMELGNSEAIKHAVRHGLGISCL 237

Query: 244 SRLAAKTPQQDGRVVILNIPLD-MKRRFWMLVHKEKYQNPLLRQFIEFC 291
           SR   +   Q G +  + +PL  + R  W + H++K+ +  LR+F+++C
Sbjct: 238 SRRVIEDQLQAGTLSEVAVPLPRLMRTLWRIHHRQKHLSNALRRFLDYC 286