Pairwise Alignments

Query, 1148 a.a., exonuclease V subunit gamma from Vibrio cholerae E7946 ATCC 55056

Subject, 1150 a.a., exodeoxyribonuclease V subunit gamma from Pseudomonas simiae WCS417

 Score =  633 bits (1633), Expect = 0.0
 Identities = 425/1144 (37%), Positives = 606/1144 (52%), Gaps = 155/1144 (13%)

Query: 2    FTVYHSNQVETLKILLVHLIKNEPLDDPFIPESILVQSPGMSQWLKMALASE-------- 53
            F V H N+++ L+ L+V  ++  PL  P   E  LVQS G++QWLK+ALA +        
Sbjct: 11   FMVVHGNRLDELRSLVVSWMRRYPLA-PLENEIALVQSNGIAQWLKLALAEDPEDDDMGG 69

Query: 54   LGVAANLEFPLPATFIWQMFTQVL--PDVPQRSAFNKEAMSWRLMELLPKLLDRTEFQPL 111
             G+AA ++  LP +F+WQ++  VL   ++P +S  +K  ++WRLM LLP+L+D+  F+PL
Sbjct: 70   CGIAAAIDVQLPGSFMWQLYRMVLGKDEIPPKSLLDKAPLTWRLMRLLPELIDQPHFEPL 129

Query: 112  QRYLQDDEDDSKRFQLAEKIADIFDGYLVYRPDWILSWEAGEDVVE--------IADQHP 163
            QR+L  D D  KR+QLAE++AD+FD Y VYR DW+  W AG   +         +   + 
Sbjct: 130  QRFLTHDTDLRKRYQLAERLADLFDQYQVYRADWLEDWAAGRHQLRNGRGESKPLNPANC 189

Query: 164  WQPILWRELYAYTHKQGHSIYHRANLYQRFIEQLASGDFDRSTWPKRLFIFGISALPPRY 223
            WQ  LWR L     ++G +   RA ++QRFIE++ + +      P R+ +FGIS+LP + 
Sbjct: 190  WQAELWRALLLDVGEEGMA-ESRAGVHQRFIERINTLEKAPEGLPSRVIVFGISSLPAQA 248

Query: 224  IDALRAMGEHIDVHLMLTNPCQHYWGDIRDRKYLAR--VAAQKRKILQINGEQVTIGSEV 281
            ++AL  +     V L + NPC+H+W DI   K L R     Q RK     G  VTI  + 
Sbjct: 249  LEALAGLARFSQVLLCVHNPCRHHWSDIVADKDLLRNEYKRQARKA----GMPVTIDPQT 304

Query: 282  SPLKGDVENYLQESMHLSHAVGNSLLASMGKMGRDNLYLLAQNDQ----------SELEL 331
                              H   + LLA+ GK GRD + LL   D             ++L
Sbjct: 305  L-----------------HQHAHPLLAAWGKQGRDYISLLDSYDDPNSYRAAFRDGRIDL 347

Query: 332  FIEIQRDSLLHHIQADILHLQEHQDDAKFASSGHKPSIAAQ-DDSLQIALCHSPIREVEV 390
            F + +  +LL+ +Q DIL L+   +  +       P++  Q D S++  + HS  REVE+
Sbjct: 348  FSDSEPTTLLNQLQDDILELRPLNETRELW-----PAVDLQRDTSIRFHIAHSAQREVEI 402

Query: 391  LHDRLLAEFERDPSLKPRDVIVMVPDINAYAPYIQAVFGNAPGE--RFIPFSISDRSADQ 448
            LHD+LL  F  DPSL+PRDVIVMVPD+++YAP+I+AVFG       RFIPF+++D+    
Sbjct: 403  LHDQLLQRFSADPSLRPRDVIVMVPDVDSYAPHIRAVFGQLERNDPRFIPFTLTDQGQRG 462

Query: 449  ESPILTAFLQLLALPQSRCLASELLELLETPAIMARFAIDEEEFATAKRWVEEAGIRWGL 508
              P+L A   LL LP SR   SE+L+LL+ PA+  RFAI E +  T  RW+E AGIRWGL
Sbjct: 463  RDPLLIAVEHLLKLPDSRFPVSEILDLLDVPALRERFAIKERDLPTLHRWIEGAGIRWGL 522

Query: 509  NSDTGAEFELPAS-EQNTWQFGIERMLLGYAMPAEAGLYELGGQWLAPYNQVQGMSAELA 567
            N++  A   LP   EQN+W+FG+ RMLLGYA+   A         + PY+++ G+ A L 
Sbjct: 523  NAEQRAGLGLPKELEQNSWRFGLRRMLLGYAVGTGAAC-----DGIEPYDEIGGLDAALI 577

Query: 568  GKLAHFVQTLSELRSQLAQTQSMEQWRYWLNELLERCFSVDLQGELALKTIRDSLVNLKQ 627
            G L   +  LS+    L+   S  QW   L  L++  F    + +       D L+   +
Sbjct: 578  GPLVALLDALSDAHQALSLPASPTQWGERLQRLIQLFFLPSSEHD-------DYLLGQLE 630

Query: 628  QLADA--------GYQQAVSPAIIRQVLTNKLSGTRISQRFLAGQVNFCTLMPMRSIPFR 679
            QL +         G Q  +   ++R+     L   R+SQRFLAG VNFCTLMPMR+IPF+
Sbjct: 631  QLRETWLETCESVGLQDELPLTVVREAWLAGLDQGRLSQRFLAGAVNFCTLMPMRAIPFK 690

Query: 680  RVCLLGMNDGVYPPNEMVEGFDLRNVQRRVGDRSRREESRYLFLEALLSAKEQLYISYVG 739
             +CLLGMNDG YP  +    FDL     R GDRSRRE+ RYL LEALLSA++QLY+S+VG
Sbjct: 691  LICLLGMNDGDYPRAQPPLDFDLMGSDYRPGDRSRREDDRYLLLEALLSARDQLYVSWVG 750

Query: 740  RSIQDNSERVPSVLVSELLEYCEQNYCLAGDENLESDDSGRRLVEHLTTQYPMVPFSPQA 799
            RSI+DNS+R  SVL+ +L ++    + LA        +S + L+E +T ++P+ PFS + 
Sbjct: 751  RSIRDNSDRPASVLIGQLRDHLASGWHLA--------NSDKPLIEAMTQEHPLQPFSARY 802

Query: 800  FIAG----SFAREWLPAARRQGQSSADFLTPLSDYLLEVSWPMELDLVELQRFWRLPVEY 855
            F  G    S+AREW      Q    A    P    L        L L +LQ F R PV++
Sbjct: 803  FHEGDALFSYAREW------QLLHEASDALPTEHDLAPHQQEEPLSLGQLQDFLRNPVKH 856

Query: 856  FFKRRLKVSFEPPLAVLEDDEPFALDGLSAYQLRDELVENLLACRDGAERDQVVAQFAKQ 915
            FF +RLKV FE     L D+EPF LD L  Y L D L+   L   D  + DQ +   A +
Sbjct: 857  FFSQRLKVFFEAAEVPLADEEPFVLDALQRYSLSDSLLNAALTRPD--QLDQTLNAQALR 914

Query: 916  QRAQGKLPVAAFGDL----------ELAQSAQQALAL-------AEKIGFLCHQPLEDEE 958
             +  G LP+  FG+           +L +  QQ LAL       AE + F  H       
Sbjct: 915  LQGSGLLPMVGFGECLRNELIEPLPDLLRRYQQLLALWPTPHTGAEPVSFEHH------- 967

Query: 959  IDLRLQPFDDGREVLLRGW---LVKRYQSGLVRARS-----GAIRSED---LLAAWIDHL 1007
                         V L GW   L +R   GL+   +     G+I++     L+  W++H+
Sbjct: 968  ------------GVQLEGWISGLHRRSDGGLLSVTTIPNSIGSIKTRKWHRLIRPWVNHV 1015

Query: 1008 CLAASGKAVTTHLIGYERKEGVQHQMLPPLNDAQQAKTLLSELVALFCQGMNQPLAYFPK 1067
               A G  ++T L+  +        +LPPL D   A+ +L  L+  +  GM++PL    K
Sbjct: 1016 VACACGLPLSTGLVASD-----DTLLLPPL-DKANAQEVLGHLLLAWHAGMSKPLPVAVK 1069

Query: 1068 TALA 1071
            TA A
Sbjct: 1070 TAFA 1073