Pairwise Alignments

Query, 1148 a.a., exonuclease V subunit gamma from Vibrio cholerae E7946 ATCC 55056

Subject, 1132 a.a., exodeoxyribonuclease V subunit gamma from Pectobacterium carotovorum WPP14

 Score =  873 bits (2256), Expect = 0.0
 Identities = 495/1133 (43%), Positives = 684/1133 (60%), Gaps = 48/1133 (4%)

Query: 1    MFTVYHSNQVETLKILLVHLIKNEPLDDPFIPESILVQSPGMSQWLKMALASELGVAANL 60
            MF +YHSNQ++ LK L+V LIK +PL DPF  E ILVQSPGM+QWL++ LA   G+AAN+
Sbjct: 1    MFRIYHSNQLDILKRLMVELIKRQPLADPFQQEVILVQSPGMAQWLQIELAGHFGIAANI 60

Query: 61   EFPLPATFIWQMFTQVLPDVPQRSAFNKEAMSWRLMELLPKLLDRTEFQPLQRYLQDDED 120
            +FPLP  F+W M   VLPD+P+ SAF+K+AM+W+LM LLP LL + +F  L  YLQDD++
Sbjct: 61   QFPLPGVFLWNMCRYVLPDIPKESAFSKDAMTWKLMHLLPDLLAQPDFAALNHYLQDDDN 120

Query: 121  DSKRFQLAEKIADIFDGYLVYRPDWILSWEAGEDVVEIADQHPWQPILWRELYAYTHKQG 180
              K  QLA ++AD+FD YL+YRP+WI +W+ G+ V ++     WQ  LWR L  YT +  
Sbjct: 121  QRKLHQLAGRVADLFDQYLIYRPEWIKAWQEGKQVDDLGGNQLWQSALWRALVDYTRELA 180

Query: 181  HSIYHRANLYQRFIEQLASGDFDRSTWPKRLFIFGISALPPRYIDALRAMGEHIDVHLML 240
               +H A LYQRFI  L          P R+FI GISALPP Y+ AL A+ +HIDVHL+ 
Sbjct: 181  QPEWHHAILYQRFITALEQAKSCPKGLPPRVFICGISALPPIYLQALNALAQHIDVHLLF 240

Query: 241  TNPCQHYWGDIRDRKYLARVAAQKRKILQINGEQVTIGSEVSPLKGD---VENYLQESMH 297
            TNPC+HYW DI+D K+LA++ A+ R++ + +GEQ     E  PL  D    E    +   
Sbjct: 241  TNPCRHYWSDIQDYKFLAKLKARHRRLHRFDGEQ---PDETRPLFRDPSQAETLFNDDG- 296

Query: 298  LSHAVGNSLLASMGKMGRDNLYLLAQNDQ-SELELFIEIQRDSLLHHIQADILHLQEHQ- 355
               ++ N LLAS GK+GRDNLYLLA+ D   E++ F+E   ++LL  +Q DIL L++H  
Sbjct: 297  -KQSINNPLLASWGKLGRDNLYLLAELDSVQEIDAFVESDGENLLQTLQRDILELEDHAV 355

Query: 356  ---DDAKFASSGHKPSIAAQDDSLQIALCHSPIREVEVLHDRLLAEFERDPSLKPRDVIV 412
                     +S  K  +A  D S+    CHSP REVEVLHDRLLA    DP L PRDVIV
Sbjct: 356  VAVSHETQNTSMQKRLLALDDRSIDFHACHSPQREVEVLHDRLLAMMADDPELMPRDVIV 415

Query: 413  MVPDINAYAPYIQAVFGNAPGERFIPFSISDRSADQESPILTAFLQLLALPQSRCLASEL 472
            M+ DI++Y P+IQAVFGNAP  R++PF+ISD+ A    P L A + LL LP SR  A ++
Sbjct: 416  MMADIDSYTPFIQAVFGNAPDNRYLPFAISDQRARHAHPALQAVISLLDLPTSRFTAEQV 475

Query: 473  LELLETPAIMARFAIDEEEFATAKRWVEEAGIRWGLNSDTGAEFELPASEQNTWQFGIER 532
            L LLE PA+ ARF I EE     + WV E+G+RWGL+ D   +  LP + Q+TW+FG+ R
Sbjct: 476  LALLEVPALAARFGIQEEGLRRLRLWVVESGVRWGLDDDNVRDLMLPPTGQHTWRFGLTR 535

Query: 533  MLLGYAMPAEAGLYELGGQWLAPYNQVQGMSAELAGKLAHFVQTLSELRSQLAQTQSMEQ 592
            MLLGYAM ++ G +    Q + PY++  G+ AELAG+LA  +  +   R +L+Q + +  
Sbjct: 536  MLLGYAMDSQVGDW----QGVLPYDESSGLIAELAGQLAELLMQIHHWRQRLSQPRVLVD 591

Query: 593  WRYWLNELLERCFSVDLQGELALKTIRDSLVNLKQQLADAGYQQAVSPAIIRQVLTNKLS 652
            W     EL+E  F  D + E AL  +      +      A Y Q V  + +R  L+ +L 
Sbjct: 592  WLPLCRELIETFFDADSETEAALALVEKQWQYVIGMGTMAHYPQQVPISRLRDELSRRLD 651

Query: 653  GTRISQRFLAGQVNFCTLMPMRSIPFRRVCLLGMNDGVYPPNEMVEGFDLRNVQRRVGDR 712
              R+SQRFLAG +NFCTLMPMRSIPF+ VCLLGMNDG+YP      GFDL   + + GDR
Sbjct: 652  QERLSQRFLAGSINFCTLMPMRSIPFKVVCLLGMNDGIYPRTLPPLGFDLMGRKIKRGDR 711

Query: 713  SRREESRYLFLEALLSAKEQLYISYVGRSIQDNSERVPSVLVSELLEYCEQNYCLAGDEN 772
            SRR++ RYLFLEALLSA+ +LYISY+GRSIQDN+ R PSVLVSEL EY  Q+Y L GDE 
Sbjct: 712  SRRDDDRYLFLEALLSAQHKLYISYIGRSIQDNTRRYPSVLVSELTEYIAQSYVLPGDEA 771

Query: 773  LESDDSGRRLVEHLTTQYPMVPFSPQAFIAG----SFAREWLPAARRQGQSSADFLTPLS 828
            L+ D S  R+V+HL  ++  +PF    F++     SFA EWL AA ++G++  DF     
Sbjct: 772  LDIDSSAERVVKHLCREHSRMPFDANNFLSSPQPLSFAAEWLAAANQKGEAQPDF---DR 828

Query: 829  DYLLEVSWPMELDLVELQRFWRLPVEYFFKRRLKVSFEPPLAVLEDDEPFALDGLSAYQL 888
            + L E +   ++ L +L+RF+R PV  FF+ RL VSF      L D+EPF +D L+ YQL
Sbjct: 829  EALSERASDRDVSLDDLKRFYRHPVRAFFQLRLGVSFMLHSDELLDEEPFVVDSLNRYQL 888

Query: 889  RDELVENLLACRDGAERDQVVAQFAKQQRAQGKLPVAAFGDLELAQSAQQALALAEKIGF 948
              EL+  L+   D         +  ++ RA G+LP  AFG++   +  Q+   LA ++  
Sbjct: 889  NSELLNTLINEGD-------TEKLYRRARAAGELPYGAFGEIYWQEQQQEMAQLAARVRD 941

Query: 949  LCHQPLE-DEEIDLRLQPFDDGREVLLRGWLVKRYQSGLVRARSGAIRSEDLLAAWIDHL 1007
                 L    E+D+ L    DG  V + GWL +    GL+R R G +  +D +  W++HL
Sbjct: 942  ELTPSLSVSREVDILL----DG--VRVSGWLNQVQPDGLLRWRPGTLSMKDGITLWLEHL 995

Query: 1008 CLAASGKAVTTHLIGYERKEGVQHQMLPPLNDAQQAKTLLSELVALFCQGMNQPLAYFPK 1067
               A+G    + L G E            L++A QA+  L+ ++  + QGM++PL    K
Sbjct: 996  AYCATGGQGESRLYGREDTA----WRFAALSEA-QAREHLAVMLDGYRQGMSKPLLLLNK 1050

Query: 1068 TALA----CVEAGFSRGKWQED-EEKSYKKMADTFNDSFYIKGEGGNRYIARI 1115
               A    C +      +  ED + K+  ++   +  +  ++GEG + Y+ RI
Sbjct: 1051 AGSAWLAECYDRESDSLRADEDAQNKARTRLLQAWQGNMGMRGEGEDYYLQRI 1103