Pairwise Alignments

Query, 1148 a.a., exonuclease V subunit gamma from Vibrio cholerae E7946 ATCC 55056

Subject, 1124 a.a., DNA helicase/exodeoxyribonuclease V, gamma subunit (EC 3.1.11.5) from Enterobacter asburiae PDN3

 Score =  904 bits (2336), Expect = 0.0
 Identities = 494/1152 (42%), Positives = 711/1152 (61%), Gaps = 54/1152 (4%)

Query: 1    MFTVYHSNQVETLKILLVHLIKNEPLDDPFIPESILVQSPGMSQWLKMALASELGVAANL 60
            M  VYHSN+++ L+ L+  +++ E LDDPF PE +LVQS GM+QWL+M+L+ + G+AAN+
Sbjct: 1    MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMVLVQSTGMAQWLQMSLSRKFGIAANI 60

Query: 61   EFPLPATFIWQMFTQVLPDVPQRSAFNKEAMSWRLMELLPKLLDRTEFQPLQRYLQDDED 120
            +FPLPA+FIW+MF +VLPD+P++SAFNK+ MSW+LM LLP++L   EF  L+ YL DD D
Sbjct: 61   DFPLPASFIWEMFVRVLPDIPEQSAFNKQGMSWKLMALLPEMLQHDEFAMLRHYLNDDTD 120

Query: 121  DSKRFQLAEKIADIFDGYLVYRPDWILSWEAGEDVVEIADQHPWQPILWRELYAYTHKQG 180
              K FQLA + AD++D YLVYR DW++ WEAGE V  + +   WQ  LW+ L  +T K G
Sbjct: 121  KRKLFQLASRTADLYDQYLVYRSDWLIRWEAGELVEGLPEAQIWQAPLWKALVEHTEKLG 180

Query: 181  HSIYHRANLYQRFIEQLASGDFDRSTWPKRLFIFGISALPPRYIDALRAMGEHIDVHLML 240
               +HRANLY RFI  L +     +  P R+FI GISALPP Y+ AL A+G+HID+H++ 
Sbjct: 181  QPKWHRANLYDRFISILENAPERPARLPSRVFICGISALPPVYLKALNALGKHIDIHILF 240

Query: 241  TNPCQHYWGDIRDRKYLARVAAQKRKILQINGEQVTIGSEVSPLKGDVENYLQESMHLSH 300
            TNPC+ YWGDI D ++LAR+  ++RK L      V +  +     G     L +   + +
Sbjct: 241  TNPCRQYWGDILDERWLARLVTRQRKRL-FEERSVPLFKD-----GSTAGQLFDEDGIQN 294

Query: 301  AVGNSLLASMGKMGRDNLYLLA---QNDQSELELFIEIQRDSLLHHIQADILHLQEHQ-- 355
             + N LLAS GK+GRD +++L+    + + +++ F++I  DSLLHHIQ DIL L+     
Sbjct: 295  -LPNPLLASWGKLGRDYIHMLSDITSSGEGDVDAFVDITPDSLLHHIQLDILDLENRAVM 353

Query: 356  --DDAKFASSGHKPSIAAQDDSLQIALCHSPIREVEVLHDRLLAEFERDPSLKPRDVIVM 413
                 +F  S  K  + A D S+ I +CHSP REVEVLHD+LLA  + DP L PRD++VM
Sbjct: 354  GVTAKEFERSDSKRKLDADDRSITIHVCHSPQREVEVLHDQLLAMLQDDPELTPRDIVVM 413

Query: 414  VPDINAYAPYIQAVFGNAPGERFIPFSISDRSADQESPILTAFLQLLALPQSRCLASELL 473
            V DI++Y+P+IQAVFG+A GER++P++ISDR A Q  P L AF+ LL+LP SR ++ ++L
Sbjct: 414  VADIDSYSPFIQAVFGSATGERYLPYAISDRRARQSHPALQAFITLLSLPDSRFISEDVL 473

Query: 474  ELLETPAIMARFAIDEEEFATAKRWVEEAGIRWGLNSDTGAEFELPASEQNTWQFGIERM 533
             LL+ P + ARF I+EE     ++WV E+G+RWG++ D   EFELP + Q+TW+FG+ RM
Sbjct: 474  ALLDVPVLAARFNINEEGLRYLRQWVNESGVRWGIDDDNVQEFELPPTGQHTWRFGLTRM 533

Query: 534  LLGYAMPAEAGLYELGGQW--LAPYNQVQGMSAELAGKLAHFVQTLSELRSQLAQTQSME 591
            LLGYAM +        G+W  + PY++  G+ AEL G LA  +  L+  R +L Q + +E
Sbjct: 534  LLGYAMESSQ------GEWNEVLPYDESSGLIAELVGHLASLLMQLNRWRHELMQPRPLE 587

Query: 592  QWRYWLNELLERCFSVDLQGELALKTIRDSLVNLKQQLADAGYQQAVSPAIIRQVLTNKL 651
             W      LL   F  D   E A+  I      +  +  ++ YQ+A+  +++R  LT +L
Sbjct: 588  AWLPVCRALLNDFFLPDSDTEAAMALIETQWQAIIDEGVNSHYQEAIPLSLLRDELTQRL 647

Query: 652  SGTRISQRFLAGQVNFCTLMPMRSIPFRRVCLLGMNDGVYPPNEMVEGFDLRNVQRRVGD 711
               RISQRFLAG +N CTLMPMRSIPF+ VCLLGMNDGVYP      GFDL +   + GD
Sbjct: 648  DQERISQRFLAGPINICTLMPMRSIPFKVVCLLGMNDGVYPRALAPLGFDLMSADPKRGD 707

Query: 712  RSRREESRYLFLEALLSAKEQLYISYVGRSIQDNSERVPSVLVSELLEYCEQNYCLAGDE 771
            RSRR++ RYLFLEAL+SA+ +LYISY+GRSIQDNSER PSVLV EL++Y  Q++ L GDE
Sbjct: 708  RSRRDDDRYLFLEALISAQSKLYISYIGRSIQDNSERFPSVLVQELVDYIGQSHYLPGDE 767

Query: 772  NLESDDSGRRLVEHLTTQYPMVPFSPQAFIAG---SFAREWLPAARRQGQSSADFLTPLS 828
                D+S +R+  H+T  +  +PF P  + A    S+A+EWLPAA+++G +  DF+  L 
Sbjct: 768  ERNCDESEQRVKAHITCFHSRMPFDPVNYTASERQSYAQEWLPAAKKEGSAHTDFIQELD 827

Query: 829  DYLLEVSWPMELDLVELQRFWRLPVEYFFKRRLKVSFEPPLAVLEDDEPFALDGLSAYQL 888
               ++      L   +LQRFW  PV  FF++RL+V+F    + + D EPF L+GL  YQL
Sbjct: 828  PRPVDT-----LTFEQLQRFWAHPVRAFFQQRLQVNFRSEESEIPDAEPFTLEGLERYQL 882

Query: 889  RDELVENLLACRDGAERDQVVAQFAKQQRAQGKLPVAAFGDLELAQSAQQALALAEKIGF 948
              +L+  L+        ++   +  ++ RA G+LP  AFG++      Q+  ALAE++  
Sbjct: 883  NLQLLNALV-------EEEDADKLYRRYRAAGQLPYGAFGEIVWEAQCQEMTALAERVR- 934

Query: 949  LCHQPLEDEEIDLRLQPFDDGREVLLRGWLVKRYQSGLVRARSGAIRSEDLLAAWIDHLC 1008
             C QP +  EIDL          V L GWL +    GL+R R   +     L  W++HL 
Sbjct: 935  ECRQPGKSIEIDLNC------NGVQLTGWLTQVQPDGLLRWRPSMLSVSQGLQLWLEHLV 988

Query: 1009 LAASGKAVTTHLIGYERKEGVQHQMLPPLNDAQQAKTLLSELVALFCQGMNQPLAYFPKT 1068
             +A G    + +  + RKEG      PP+ +++QA   LS  +  + QGMN+PL   P++
Sbjct: 989  YSADGHKGESRI--FVRKEG--EWRFPPM-ESEQALRYLSLHIEGYRQGMNKPLLLLPES 1043

Query: 1069 ALACVEAGF--SRGKWQEDE---EKSYKKMADTFNDSFYIKGEGGNRYIARIWPQWSDEL 1123
              A ++A +         DE   +K+  K    +  +  ++GEG + +  R+W     E 
Sbjct: 1044 GGAWIKACYDAQNDAMLTDEASLQKARSKFMQAYEGNMMVRGEGEDVWYQRLWRTLEPEY 1103

Query: 1124 AKTLRQLAIKVL 1135
             + + + A + L
Sbjct: 1104 FEAITEEAQRYL 1115