Pairwise Alignments

Query, 1148 a.a., exonuclease V subunit gamma from Vibrio cholerae E7946 ATCC 55056

Subject, 1230 a.a., RecBCD enzyme subunit RecC from Acinetobacter radioresistens SK82

 Score =  248 bits (632), Expect = 3e-69
 Identities = 243/982 (24%), Positives = 421/982 (42%), Gaps = 156/982 (15%)

Query: 33  ESILVQSPGMSQWLKMALASELGVAANLEFPLPAT-FIWQMFTQVLPDVPQRSAFN--KE 89
           +  +V +P + QWL   +A E G++AN  F      F W  + QVL D  +    N  + 
Sbjct: 36  QHFVVPTPAIEQWLAQKMAEEQGISANQLFHQRIRGFQWYAYQQVLADKDKVRKANIPRL 95

Query: 90  AMSWRLMELLPKLLDRTEFQPLQRY--------------------LQDDEDDSKRFQLAE 129
            M WR+ + L   ++  + Q  Q++                    ++  +     + +AE
Sbjct: 96  IMKWRVYQALGPFIEAEKLQLDQQHPLYPIICRIYDTAEGLEPGIIRQLKKQGMLYWVAE 155

Query: 130 KIADIFDGYLVYR---------------PDWILSWEAGEDV----------VEIA----- 159
           +++ +F  Y+VYR                +W+ +W   + +           EI+     
Sbjct: 156 QVSSLFSNYMVYRGYCTKKGCTDVCRCPTNWLKAWGRNQPLDIEALFYTTGTEISAFTLN 215

Query: 160 ---DQHPWQPILWRELYAYTHKQGHSIYHRANLYQRFIEQLASGDFDRSTWPKRLFIFGI 216
              +   WQ  LW+E++   H+    +      + + +EQ A+        P++L +F +
Sbjct: 216 QAHELEGWQRWLWQEVF---HEDFELMQEIDTEFWQQLEQEATRKQALKRLPQQLVVFTL 272

Query: 217 SALPPRYIDALRAMGEHIDVHLMLTNPCQHYWGDIRDRKYLARVAAQKRKILQINGEQVT 276
             LPP  +  LR +G++IDV ++  NP Q YW D  D  +      +KR  L++    ++
Sbjct: 273 LDLPPIQLQFLRRLGQYIDVFILHYNPSQEYWADSVDPVW------KKRYDLRVKERFIS 326

Query: 277 IGSEVSPLKGDVENYLQE-SMHLSHAVGNS---LLASMGKMGRDNLYLLAQNDQSE---- 328
              + + +  D++ + ++ ++H +  V  S   LL   GK  RD+  LL+     E    
Sbjct: 327 KNPQATDV--DIKKFFEDFTLHFNAEVRESRHPLLTRFGKQARDHFSLLSSLSSGEEGQW 384

Query: 329 LELFIEIQRDSLLHHIQADILHLQEHQDDAKFASSGHKPSIAAQDDSLQIALCHSPIREV 388
           ++ F++   D+LL  +Q+DIL+L E Q         H+  + A DDS+QI +CHS +R++
Sbjct: 385 VDAFVDEFPDNLLGKLQSDILYLAEPQK--------HRYPLNATDDSIQIHVCHSSLRQL 436

Query: 389 EVLHDRL---LAEFERDPSLKPRDVIVMVPDINAYAPYIQAVFGNAP------------- 432
           EVL D+L   L++  +D   +P DV+V+VP++    P I++VF  AP             
Sbjct: 437 EVLKDQLTYWLSQSSKDQQRRPSDVLVLVPNLKELEPLIRSVFAVAPKYGISSTDSNIFQ 496

Query: 433 -----GERFIPFSISDRSADQESPILTAFLQLLALPQSRCLASELLELLETPAIMARFAI 487
                 +  +P  I+  +    S    A L+ + L + R    E  + L   A    + +
Sbjct: 497 AATRERQVHLPIKIAGVAQLDASNAWRAVLERIQLVRGRFTLQEFSDWLNLTATQQCYGL 556

Query: 488 DEEEFATAKRWVEEAGIRWGLNSDTGAEFELPASEQN---TWQFGIERMLLGYAMPAEAG 544
           D          +  AG + GL++    ++ L   +++   T++F ++R+ LG A+P    
Sbjct: 557 DVNRSERMLVLLAAAGFKRGLDAQ-HLQYSLSRHDEDFRFTFKFALDRLALGIAIPDHTI 615

Query: 545 LYELGGQWLAPYNQVQGMSAELAGKLAHFVQTLSELRSQLAQTQSMEQ--WRYWLNELLE 602
             E        + QVQ    EL GKL    Q   + R  L   +  E+     WL  L E
Sbjct: 616 FNE-----TLSFAQVQPSDFELVGKLIEIYQDFDQRRDWLLCHELGERVVVESWLQRLNE 670

Query: 603 RCFSVDLQGELALKTIRDSLVNLKQQLADAGYQQAVSPAIIRQVL---------TNKLSG 653
                + QG  ALK +R+ +    + L  A +        +R +           N    
Sbjct: 671 DIAEFEQQGITALKPVREIIHKQIRMLTLANFYSEQEEQNLRGICLPLAYLIEEINTALD 730

Query: 654 TRISQRFLAGQVNFCTLMPMRSIPFRRVCLLGMNDGVYPPNEMVEGFDLRNVQR-RVGDR 712
            +I Q    GQ+ F  +  +R +P+R + +L ++ G +P       FDL ++ R ++GDR
Sbjct: 731 AQIEQAEPTGQITFSQIGQIRPLPYRLIVMLNLDSGTFPSRSQRLPFDLMDILRPQLGDR 790

Query: 713 SRREESRYLFLEALLSAKEQLYISYVGRSIQDNSERVPSVLVSELLEYCEQNYCLAGDEN 772
           SR E+ +  FL+ALL A+E L++ Y G  + D   R PS  + E +++      +A ++ 
Sbjct: 791 SRLEDDQGAFLDALLLAQENLWLFYNGFDVNDGEVREPSSTLQEFVQH--MALIVASEQP 848

Query: 773 LESDDSG--------RRLVEHLTTQYPMVPFSPQAFIAGSFAR---EW------LPAARR 815
            E  D           R +E L   + + PF P  F      R   +W      L  AR 
Sbjct: 849 DEVIDQKISLNGIEVPRQLEQLYHVHHLQPFDPAGFATEKLIRYQDQWFNVAQHLLQARG 908

Query: 816 QGQSSADFLTPLSDYLLEVSWPMELDLVELQRFWRLPVEYFFKRRLKVSFEPPLAVLE-- 873
           Q Q  A+   PL+   ++V    +         W   V +  +  LK      L+  E  
Sbjct: 909 QRQPWANIPYPLNTENIQVLHSQQ---------WIQDVIFPARLYLKTLGVENLSSSEST 959

Query: 874 -DDEPFALDGLSAYQLRDELVE 894
              EP  LDGL  Y +RD L +
Sbjct: 960 AQHEPLILDGLGRYAIRDFLYQ 981