Pairwise Alignments

Query, 1208 a.a., exodeoxyribonuclease V subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 1190 a.a., UvrD-helicase domain-containing protein from Rhodanobacter sp000427505 FW510-R12

 Score =  469 bits (1207), Expect = e-136
 Identities = 390/1241 (31%), Positives = 585/1241 (47%), Gaps = 99/1241 (7%)

Query: 1    MSADSNKLAVTLDTLRFPLHGARLIEASAGTGKTYTIAGLYLRLVLGHGCAETRHAHPLS 60
            M+A        LD    PLHG  LIEASAGTGKT+ I  LYLRL+L  G         L 
Sbjct: 1    MTATDATALPPLDWRAMPLHGRVLIEASAGTGKTWNIGVLYLRLLLERG---------LR 51

Query: 61   VDQILVVTFTEAATAELRDRIRRRLHDARLAFARGASD----DPL---LRSLLAEFTDHN 113
            V+QILV TFT+AA  ELR+R+RRRL +A       A D    DPL   L +L  +     
Sbjct: 52   VEQILVTTFTDAAAQELRERLRRRLVEAERLLEAAARDVTSADPLESWLAALCPDADSVR 111

Query: 114  LAVSLLLSAERQMDEAAIFTIHGFCQRMLTQNAFESGSRFENEFVTDESRLKAQVVADYW 173
            LA+  +  A   +D A + TIH  CQR+      ESG+ F ++ + DE +L  + V D+W
Sbjct: 112  LALRRIQLARSDLDRAPVSTIHALCQRIQRDYPLESGAAFADDQLFDEQQLMRECVEDFW 171

Query: 174  RRQFYPLPISLASEVRRLWPAPSALLAEIAGYLSGPPVKLTTPLMEGDLAALQQAQIARI 233
            RR++    +        L   P  LL ++ G  +    ++      G L  L  A    +
Sbjct: 172  RRRYLAGAVDPREAELLLKDGPEGLLRDLGGLANSVDARIEA----GGLTELDHA----L 223

Query: 234  CEIKQHWLVEREEIEPAVTGSDLHKNSQNALLRRLPILDAWAQSETHDLHVPSELEEFTQ 293
              ++    +   E++     + L+K +  AL  RL  +    ++        S  + F  
Sbjct: 224  ATLRGDDSIA--ELQRLAGDATLYKRANAALRSRLGEITQALRNGDEAQLAKSISDVFEP 281

Query: 294  SGLLAKSKKGNPPQLALFERIEAFLA-------EPVSLKTPLLVHAIHHCRHWLAKAKST 346
              LLA++  G   +LA    I A            + ++  +L  A   CR  + +    
Sbjct: 282  DKLLAQAAAGRAGELAAHPLIHALQTLRPLLGIRDILVRGEVLAAAAQTCRDEMPRRARQ 341

Query: 347  HHWLSFDDLLTQLSAALDND-EQGLLGERIRTLYPVAMIDEFQDTDPLQYSIFSRLYLDY 405
               L+F  L+  +   L  D    LL +R+   +PVA+IDEFQDTD  Q++IF R+Y + 
Sbjct: 342  RQVLTFSMLIDAVYQRLCGDASDDLLADRLFEAFPVALIDEFQDTDQRQFAIFERIYRE- 400

Query: 406  PQCGLLMIGDPKQAIYAFRGADIFTYIKARNQVNAHYTLGTNWRSSAAMVAAVNQVFSSA 465
             +  L+MIGDPKQAIY+FRG DI  Y++A  Q    ++LGTN RSS A+V A+N  +   
Sbjct: 401  -RGTLVMIGDPKQAIYSFRGGDIAAYLRAGEQAGQRFSLGTNHRSSRALVEALNAWYGHT 459

Query: 466  THPFIYSDDIPFQPVAASPGADKRHWSLEGQ--VQPALTYWWPEDLDKPQSKTDYYAQMA 523
               F     I +QPV  +  AD++ ++++GQ    P + + +  D    +S     A   
Sbjct: 460  EGGF-GQPQIRYQPVEPAGKADEQPYTVDGQPVTLPLVIHPFRGDAVDVKSLGTLEALAL 518

Query: 524  EACAAQIQHILTASASGAATFHRGEAIEAGDLAVLVRTGNEARMVRDALSQQGIASVYLS 583
            + CA +I  +L            G  +  GD+AVL+ T  +   +R  L  +G+  V  S
Sbjct: 519  DDCANRIAELLNDPRQAIG----GRRLTPGDVAVLLSTNKQIVALRQRLVARGVPCVG-S 573

Query: 584  NRDSVFASDVAQDIERLLLAVWQPEDERLLRAAVASNLFALTASELDALNNDENEWEQLI 643
             R ++FA +VA+++E +L AV   +D++ +R A+A+ L   T  +  A       +E+ +
Sbjct: 574  GRGNIFAGEVARELELVLYAVLHADDDQAVRGALATTLLGATLEQFHAWQAQAAAFEREL 633

Query: 644  AEFRQYRRLWSERGVLPMLRAVLTQRHIAERWLAESEGERWLTDYLHISELLQQATREID 703
              F  +R L   RGVL ++  +L  R  A   L   EGER LTD  H+ ELL        
Sbjct: 634  ERFEAWRALVRSRGVLALVGELLAAR--ATALLMLPEGERVLTDLRHLGELLAAEEGARQ 691

Query: 704  SDQGLLRFLTQAMADAAQG-LGGSDEQIQRLESERRLVQIVTIHKSKGLEYPLVFLPFVM 762
               GL  +L +   +   G    +DE+  R+ES+ R VQ++TIH SKGLE+P+VFLP   
Sbjct: 692  GLDGLYAWLQEMRREGGDGDAEAADERQLRIESDARRVQLLTIHASKGLEFPIVFLPLAW 751

Query: 763  SYRESSEGK------YYDAESATTWVDLTGNEEA--LAKADQERLAEDLRLLYVALTRAV 814
               + +  +      Y+DA+     VDL     A    +  +E L E LRLLYVALTRAV
Sbjct: 752  RIGDRNGPRAPKLLRYHDADGQRC-VDLGSAHFAGHRVRHFREELEERLRLLYVALTRAV 810

Query: 815  YGCFIGIAP--LRNGNSSQEPTSAHRSAMGFLLQDGQEG-GIADLQQALLKQCENLPDVV 871
            +   +  A   LR G+ +Q    A   A+  LL   Q    + + + +L      L  + 
Sbjct: 811  HAVHVYWADRGLRPGDDAQAWAWA---AIDLLLGQAQRKLELPEGEASLAAMATALGGMQ 867

Query: 872  QCPPPKRFEQAYQPP-QLDERELTARELSQAIDRRWRVTSYSGL------VMQSSHARHD 924
               P       Y+PP +      T   L Q    +W + S+SGL      +++ S +  +
Sbjct: 868  LAAPFADIYTRYRPPVEAPAPRATQAPLPQLRPFQW-LHSFSGLTRHAATLIEDSGSADE 926

Query: 925  PLQELPLLEVGGFDLDSAQERDGAALESVERSIFNFP-RGARPGTFLHSLFEEV------ 977
               E P +EVG          DG       R +  +P RG R G  +H +FE        
Sbjct: 927  TGAEEPAIEVGD------DTEDG-------RLLALYPLRGPRFGDAVHQVFELAQPGPLW 973

Query: 978  -DFQQSAHSEPNTKIIL--ELMESEQIESEWLPVLQQLVDTVLSTPLDGKALRLQQIMAA 1034
             D +Q  H +   + +    L   E +E      + +++D      L G  LRL  +   
Sbjct: 974  PDQRQLLHRQLGAQAVAAPHLAHEEALER-----VGRMIDRARQADL-GDGLRLLDLAPD 1027

Query: 1035 QRLTELEFLLPIEVLDAPTLNRITQRHDPLSAHAGDLGFHAVQGMLKGFIDLVFQYQGRY 1094
            QR+ E EF  P+  +    L R+   H    A    L    + GML GF+DL+F   GR+
Sbjct: 1028 QRIAEFEFQFPVWQVPLAPLRRLCAAHGHAEAIPASLDATTLNGMLTGFVDLIFARDGRF 1087

Query: 1095 YVLDWKSNHLGDDPAAYHPQRLGSAMAEHRYDLQYQIYALALHRFLRSRLAHYNYEQHFG 1154
            +VLD+K+N LG     Y    L +AM  H Y LQ  +Y +ALHR+LR R+  Y  E+H G
Sbjct: 1088 HVLDYKTNWLGARLRDYQGDSLAAAMTVHHYPLQALLYTVALHRYLRQRMDGYTAERHLG 1147

Query: 1155 GVFYLFLRGMDGRGDQGVFHTKPSLALLDELDGLIAGRELA 1195
              +YLF+R +      GV+  +   AL++ LD   AG + A
Sbjct: 1148 ESWYLFVRALGLAPGLGVWRRRWPAALVEALDDAFAGAQEA 1188