Pairwise Alignments

Query, 1208 a.a., exodeoxyribonuclease V subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 705 a.a., ATP-dependent helicase from Variovorax sp. OAS795

 Score = 58.5 bits (140), Expect = 2e-12
 Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 38/202 (18%)

Query: 280 HDLHVPSELEEFTQSGLLAKSKKGNPPQLALFERIEAFLAEPVSLKTPL---LVHAIHHC 336
           H++ + S +  F + G            LA++ R        V+ + PL   L  A   C
Sbjct: 160 HEIGLSSSVNRFPRKGTC----------LAIYSRC-------VNTRAPLADVLAQAFPWC 202

Query: 337 RHWLAK----------AKSTHHWLSFDDLLTQLSAALDNDEQGLLGERIRTLYPVAMIDE 386
             W A+          AK   + L +DDLL   +  +    +  L E +   +   ++DE
Sbjct: 203 AEWEAELKRLFGAYVEAKQQQNVLDYDDLLLYWAGMV---AEPALAELVGARFDHVLVDE 259

Query: 387 FQDTDPLQYSIFSRLYLDYPQCGLLMIGDPKQAIYAFRGA---DIFTYIKARNQVNAHYT 443
           +QDT+ LQ SI   L  D    G+ ++GD  Q+IY+FRGA   +I  +    +Q     T
Sbjct: 260 YQDTNLLQASILLALKPDGR--GVTVVGDDAQSIYSFRGATVRNILDFPSQFSQAARVVT 317

Query: 444 LGTNWRSSAAMVAAVNQVFSSA 465
           L  N+RS+  ++   N+V + A
Sbjct: 318 LERNYRSTQPILDVSNRVIAHA 339



 Score = 27.3 bits (59), Expect = 0.005
 Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 10/57 (17%)

Query: 24 LIEASAGTGKTYTIAGLYLRLVLGHGCAETRHAHPLSVDQILVVTFTEAATAELRDR 80
          L+ A AG+GKT T+A     L+ G           +   ++L++TF+  A  E+  R
Sbjct: 51 LVIAGAGSGKTSTLAHRVAHLIAG----------GVDPQRLLLLTFSRRAAIEMERR 97