Pairwise Alignments

Query, 1208 a.a., exodeoxyribonuclease V subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 734 a.a., ATP-dependent helicase from Paraburkholderia sabiae LMG 24235

 Score = 62.8 bits (151), Expect = 1e-13
 Identities = 144/564 (25%), Positives = 211/564 (37%), Gaps = 123/564 (21%)

Query: 295 GLLAKSKKGNPPQLALFERIEAFLAEPVSLKTPLLVHAIHHCRHWLAK----------AK 344
           G  AK K+  P + A F      +    SL   +L  A   CR W A           AK
Sbjct: 170 GFSAKEKRF-PSKSACFAIYSRVVNTGASL-ADVLNSAFPWCREWEADLRMLFAAYVDAK 227

Query: 345 STHHWLSFDDLLTQLSAALDNDEQGLLGERIRTLYPVAMIDEFQDTDPLQYSIFSRLYLD 404
                L +DDLL   S       +  +   +   +   ++DE+QDT+ LQ SI   L  D
Sbjct: 228 QKQSVLDYDDLLLYWSHMA---AEPAIAADLSGRFDHVLVDEYQDTNRLQASILLALKPD 284

Query: 405 YPQCGLLMIGDPKQAIYAFRGADIFTYIKARNQVNAHY-------TLGTNWRSSAAMVAA 457
               GL ++GD  Q+IY+FRGA +   +       AH+       TL  N+RS+  ++ A
Sbjct: 285 GR--GLTVVGDDAQSIYSFRGATVRNIL----DFPAHFDPPAKQVTLERNYRSTQPILEA 338

Query: 458 VNQVFSSATHPFIYSDDIPFQPVAASPGADKRHWSLEGQVQPALTYWWPEDLDKPQSKTD 517
            N V   +T  +                  K  W+ +   Q            +P   T 
Sbjct: 339 SNAVIDLSTERY-----------------TKNLWTDKASAQ------------RPHLVT- 368

Query: 518 YYAQMAEACAAQIQHILTASASGAATFHRGEAIEAGDLAVLVRTGNEARMVRDALSQQGI 577
             A  A+     ++ +L A  +G         ++    AVL R  + +  +   L+++ I
Sbjct: 369 -VADDADQARYIVEQVLAAREAG---------MKLKSQAVLFRAAHHSATLEIELTRRNI 418

Query: 578 ASVY---LSNRDSVFASDVAQ---------------DIERLLLAVWQPEDERLLRAAVAS 619
             V    L   DSV   DV                  + +LL  V      R+L    A 
Sbjct: 419 PFVKFGGLKFLDSVHVKDVLAVLRWAENPRDRVAGFRVVQLLPGVGPATAARVLDDIAAR 478

Query: 620 NLFALTASELDALNNDENEWEQLIAEFRQYRRLWSERGVLPMLRAVLTQRHIAERWLAES 679
                + S LD  +         +A F    R   +  +   + A +  R     W AE 
Sbjct: 479 ADALGSGSALDVAHGVSGCAAGALAAFAPPARTLEDWHLFVAMMASVCGRQTP--WPAEF 536

Query: 680 E-GERWLTDYL---HISELLQQATR-EIDSDQGLL----RFLTQAMADAAQGLGGSDEQI 730
           E   RW   +L   H    ++QA   +++S  G      RFLT+   D       SDE  
Sbjct: 537 EMVRRWYEPHLERNHEDASIRQADLVQMESIAGTYASRERFLTELTLDPPDAT--SDESG 594

Query: 731 QRLESERRLVQIVTIHKSKGLEYPLVF-LPFVMSYRESSEGKYYDAESATTWVDLTGNEE 789
             L  E  L+ + TIH +KG E+  VF L  V     S  G              TG+EE
Sbjct: 595 VPLIDEDYLI-LSTIHSAKGQEWRNVFVLNGVDGCIPSDLG--------------TGSEE 639

Query: 790 ALAKADQERLAEDLRLLYVALTRA 813
            +   D+ER     RLLYVA+TRA
Sbjct: 640 EI---DEER-----RLLYVAMTRA 655



 Score = 33.1 bits (74), Expect = 9e-05
 Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 16/115 (13%)

Query: 21  GARLIEASAGTGKTYTIAGLYLRLVLGHGCAETRHAHPLSVDQILVVTFTEAATAELRDR 80
           GA L+ A AG+GKT T+A     LV+       +   P    +IL++TF+  A  E+  R
Sbjct: 55  GALLVIAGAGSGKTNTLAHRVANLVV-------KGTDP---RRILLLTFSRRAALEMTRR 104

Query: 81  IRRRLHDARLAFARGASDDPLLRSLLAEFTDHNLAVSLLLSAERQMDEAAIFTIH 135
           +       R+A A   +   L + L    T H++   LL      +  +  FTI+
Sbjct: 105 V------TRIASAALGTRAALAQGLTWSGTFHSVGARLLREYADLIGLSPTFTIN 153