Pairwise Alignments

Query, 1208 a.a., exodeoxyribonuclease V subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 673 a.a., DNA helicase Rep from Pantoea agglomerans CFBP13505 P0401

 Score = 68.9 bits (167), Expect = 1e-15
 Identities = 116/527 (22%), Positives = 191/527 (36%), Gaps = 137/527 (25%)

Query: 335 HCRHWLAKAKSTHHWLSFDDLLTQLSAALDNDEQGLLGERIRTLYPVAMIDEFQDTDPLQ 394
           HC    ++   + + L FDDL+   +  L  +++  + ER +      ++DE+QDT+  Q
Sbjct: 166 HCYALYSQHLKSCNVLDFDDLILLPTLLLQRNQE--VRERWQQRIRYLLVDEYQDTNTSQ 223

Query: 395 YSIFSRLYLDYPQCGLLMIGDPKQAIYAFRGADIFTYIKARNQVNA--HYTLGTNWRSSA 452
           Y +   L     +    ++GD  Q+IY++RGA     +       A     L  N+RSS 
Sbjct: 224 YELVKLLV--GARARFTVVGDDDQSIYSWRGARPQNLVLLNQDFPALEVVKLEQNYRSSQ 281

Query: 453 AMVAAVNQVFSSATHPFIYSDDIPFQPVAASPGADKRHWSLEGQVQPALTYWWPEDLDKP 512
            ++ A N + ++  H F                 +KR +S  GQ                
Sbjct: 282 RILKAANILIANNPHVF-----------------EKRLFSELGQ---------------- 308

Query: 513 QSKTDYYAQMAEACAAQIQHILTASASGAATFHRGEAIEAGDLAVLVRTGNEARMVRDAL 572
                  +++    A   +H            H     +  D A+L R  +++R     L
Sbjct: 309 ------GSELKVLTANSEEHEAERVTGELIAHHFINRTQYKDYAILYRGNHQSRTFEKFL 362

Query: 573 SQQGIASVYLSNRDSVFASDVAQDIERLLLAVWQPEDERLLRAAVASNLFALTASELDAL 632
            Q  I    +S   S F+    +D+   L  +  PED+      V +    +  + L  L
Sbjct: 363 MQNRI-PYRISGGTSFFSRPEIKDLLAYLRVLTNPEDDSAFLRIVNTPRREIGPATLQKL 421

Query: 633 NNDENEWEQLIAEFR-------QYRRLWSERGVLPMLRAV--------LTQRHIA----- 672
                EW  L ++            +  S RG+  + R          LT+R        
Sbjct: 422 ----GEWANLRSKSLFNASFDVGLGQTLSGRGLEHLQRFTHWLNEIIQLTEREPVNAVRD 477

Query: 673 -------ERWLAESEGE---------------RWLTDYLHISELLQQATREIDSDQGLLR 710
                  E WL E+ G                +W+T+ L  S        +ID    L +
Sbjct: 478 LIRGIDYESWLFETSGSPKAAEMRMKNVNTLFQWMTEMLEGS--------DIDEPMTLAQ 529

Query: 711 FLTQAMADAAQGLGGSDEQIQRLESERRLVQIVTIHKSKGLEYPLVFLPFVMSYRESSEG 770
            +T+         G SDE++ +       VQ++T+H SKGLE+P VF             
Sbjct: 530 VVTRFTLRDMMERGESDEELDQ-------VQLMTLHASKGLEFPYVF------------- 569

Query: 771 KYYDAESATTWVDLTGNEEAL----AKADQERLAEDLRLLYVALTRA 813
                        L G EE L    +  D+  + E+ RL YV +TRA
Sbjct: 570 -------------LVGMEEGLLPHQSSIDENNIEEERRLAYVGITRA 603



 Score = 32.0 bits (71), Expect = 2e-04
 Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 9/65 (13%)

Query: 21 GARLIEASAGTGKTYTIAGLYLRLVLGHGCAETRHAHPLSVDQILVVTFTEAATAELRDR 80
          G  L+ A AG+GKT  I      L+   G  + RH        I  VTFT  A+ E+++R
Sbjct: 16 GPCLVLAGAGSGKTRVITNKIAHLIRECG-YQARH--------IAAVTFTNKASREMKER 66

Query: 81 IRRRL 85
          + + L
Sbjct: 67 VAQTL 71