Pairwise Alignments

Query, 1208 a.a., exodeoxyribonuclease V subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 1154 a.a., double-strand break repair helicase AddA from Magnetospirillum magneticum AMB-1

 Score = 82.4 bits (202), Expect = 2e-19
 Identities = 124/486 (25%), Positives = 194/486 (39%), Gaps = 77/486 (15%)

Query: 383 MIDEFQDTDPLQYSIFSRLYLDY--------PQCGLLMIGDPKQAIYAFRGADIFTYIKA 434
           +IDE QDT+P Q+++  +L  ++            +  +GD KQ+IY+F+ AD   + + 
Sbjct: 405 LIDEAQDTNPDQWAVVEKLTEEFFAGRGARETLRTVFAVGDAKQSIYSFQRADPREFERM 464

Query: 435 RNQVNAHYT----------LGTNWRSSAAMVAAVNQVFSSAT---HPFIYSDDIPFQPVA 481
           R     H            L  ++RS+ A++ AVN VF+            +DI   P  
Sbjct: 465 REAFATHVPAAGGKWEVVDLNLSFRSAPAVLEAVNAVFAPGRPGRDGVAGDEDITHLPHR 524

Query: 482 ASPGADKRHWSL-EGQVQPALTYWWP--EDLDKPQSKTDYYAQMAEACAAQIQHILTASA 538
                    W + E +    L  W P  E +     +T    ++A   AA+I+    A  
Sbjct: 525 GGQAGRVEVWPVVEPRPADELPAWKPPVERIRGDSPRT----RLARLMAARIR----AMI 576

Query: 539 SGAATFHRGEAIEAGDLAVLVRTGNEARMVRDALSQQGIASVYLSNRDSVFASD--VAQD 596
            G     +G  + AGD+ VLVR       V D + +     V ++  D +  ++     D
Sbjct: 577 DGEVLESKGRPVRAGDVLVLVR--RRGGFVEDLVRELKSRKVEVAGADRMVLTEQMAVMD 634

Query: 597 IERLLLAVWQPEDERLLRAAVASNLFALTASELDAL----NNDENEWEQLI--------- 643
           +  L   +  PED+  L   +   L  L   +L  L      D   WE L          
Sbjct: 635 LMALGNFLLLPEDDLTLATVLKGPLVGLGEDQLFTLAHHRGKDVGLWEALRQGVADEGGV 694

Query: 644 --AEFRQYRRLWSERGVLPMLRAVLTQRHIAERWLAESEGERWLTDYLHISELLQQATRE 701
             A FR+   L ++   +       +   +  R L    G R L     ++ L  +A   
Sbjct: 695 FEAAFRRLSELLAQADRV-------SPHTLYARVLGPLGGRRRL-----LARLGLEAEDS 742

Query: 702 IDSDQGLLRFLTQAMADAAQGL-----GGSDEQIQRLESERR-LVQIVTIHKSKGLEYPL 755
           ID    L     +A   + QG       G+ E  + LE   R  V+I+T+H SKGL+ P+
Sbjct: 743 IDEFMSLTLAFERAHPPSLQGFLHWLEAGALEIKRDLEQAGRDAVRIMTVHGSKGLQAPI 802

Query: 756 VFLPFVMSYRESSEGKYYDAE---SATTWVDLTGNEEALAK--AD---QERLAEDLRLLY 807
           VFLP  M     S    +  E       W     + +++ +  AD   Q R  E  RLLY
Sbjct: 803 VFLPDTMQVPTRSPRLLWLGEGEGELPAWPPRAEDMDSVCRQGADARKQSREREYRRLLY 862

Query: 808 VALTRA 813
           VA+TRA
Sbjct: 863 VAMTRA 868



 Score = 47.8 bits (112), Expect = 5e-09
 Identities = 45/132 (34%), Positives = 59/132 (44%), Gaps = 21/132 (15%)

Query: 25  IEASAGTGKTYTIAGLYLRLVLGHGCAETRHAHPLSVDQILVVTFTEAATAELRDRIRRR 84
           + ASAGTGKT  +    L L+L                +IL +TFT+AA AE+ +RI  R
Sbjct: 27  VAASAGTGKTKVLTDRVLTLLLAG----------TPPHKILCLTFTKAAAAEMSNRIAGR 76

Query: 85  LHDARLAFARGASDDPLLRSLL------AEFTDHNLAVSLLLSAERQMDEAAIFTIHGFC 138
           L     A     +DD  L  LL       E T      + LL A   M    + TIH FC
Sbjct: 77  LGQWATAHDSDLADD--LGRLLGRAPSPGEMTGARRLFAALLDAPGGMH---METIHAFC 131

Query: 139 QRMLTQNAFESG 150
           Q +L +   E+G
Sbjct: 132 QSLLRRFPLEAG 143