Pairwise Alignments

Query, 1208 a.a., exodeoxyribonuclease V subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 674 a.a., DNA helicase Rep from Dickeya dianthicola ME23

 Score = 72.4 bits (176), Expect = 1e-16
 Identities = 113/510 (22%), Positives = 191/510 (37%), Gaps = 103/510 (20%)

Query: 335 HCRHWLAKAKSTHHWLSFDDLLTQLSAALDNDEQGLLGERIRTLYPVAMIDEFQDTDPLQ 394
           HC     +     + L FDDL+   +  L  +E+  + ER +      ++DE+QDT+  Q
Sbjct: 166 HCYRLYDEHLRACNVLDFDDLILLPTLLLKRNEE--VRERWQNRLRYLLVDEYQDTNTSQ 223

Query: 395 YSIFSRLYLDYPQCGLLMIGDPKQAIYAFRGA--DIFTYIKARNQVNAHYTLGTNWRSSA 452
           Y +   L     +    ++GD  Q+IY++RGA     + ++          L  N+RSS 
Sbjct: 224 YELIKLLVGS--RARFTVVGDDDQSIYSWRGARPQNLSLLQQDFPQLQVIKLEQNYRSSG 281

Query: 453 AMVAAVNQVFSSATHPFIYSDDIPFQPVAASPGADKRHWSLEGQVQPALTYWWPEDLDKP 512
            ++ A N + ++  H F                 +KR +S  G                 
Sbjct: 282 RILKAANILIANNPHVF-----------------EKRLYSELG----------------- 307

Query: 513 QSKTDYYAQMAEACAAQIQHILTASASGAATFHRGEAIEAGDLAVLVRTGNEARMVRDAL 572
                Y  ++    A    H            H     + GD A+L R  +++R+    L
Sbjct: 308 -----YGEELKIITANNEDHEAERVVGELIAHHFIRKTQYGDYAILYRGNHQSRLFEKVL 362

Query: 573 SQQGIASVYLSNRDSVFASDVAQDIERLLLAVWQPEDERLLRAAVASNLFALTASELDAL 632
            Q  I    +S   S F+    +D+   L  +  PED+      V +    +  + L  L
Sbjct: 363 MQNRIP-YRISGGTSFFSRPEIKDLLAYLRVLTNPEDDSAFLRVVNTPKREIGPATLQKL 421

Query: 633 NNDENEWEQLI--AEFRQ-YRRLWSERGVLPMLRAVLTQRHIAERWLAESEGERWLTDYL 689
               N+  + +  A F     +  S RG+  + R       IA   LAE E  + + D +
Sbjct: 422 GEWANQRNRSLFNASFDMGLSQTLSGRGLESLQRFTQWMGDIAR--LAEPEPVKAVRDLI 479

Query: 690 H---ISELLQQATREIDSDQGLLRFLTQAMADAAQGLGGSD-----------------EQ 729
           H       L + +    + +  ++ +        + L GSD                 + 
Sbjct: 480 HGLDYESWLYETSPSPKAAEMRMKNVNTLFTWMTEMLEGSDLDEPMTLTQVVTRFTLRDM 539

Query: 730 IQRLESERRL--VQIVTIHKSKGLEYPLVFLPFVMSYRESSEGKYYDAESATTWVDLTGN 787
           ++R E+E  L  VQ++T+H SKGLE+P V+L                           G 
Sbjct: 540 MERNEAEEELEQVQLMTLHASKGLEFPYVYL--------------------------VGM 573

Query: 788 EEAL----AKADQERLAEDLRLLYVALTRA 813
           EE L       D++ + E+ RL YV +TRA
Sbjct: 574 EEGLLPHQTSIDEDNIDEERRLAYVGITRA 603



 Score = 33.9 bits (76), Expect = 5e-05
 Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 9/65 (13%)

Query: 21 GARLIEASAGTGKTYTIAGLYLRLVLGHGCAETRHAHPLSVDQILVVTFTEAATAELRDR 80
          G  L+ A AG+GKT  I      L+ G G  + RH        I  VTFT  A  E+++R
Sbjct: 16 GPCLVLAGAGSGKTRVITQKIAHLIRGCG-YQARH--------IAAVTFTNKAAREMKER 66

Query: 81 IRRRL 85
          + + L
Sbjct: 67 VAQTL 71