Pairwise Alignments

Query, 1208 a.a., exodeoxyribonuclease V subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 752 a.a., Superfamily I DNA and RNA helicases from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 63.9 bits (154), Expect = 5e-14
 Identities = 111/500 (22%), Positives = 192/500 (38%), Gaps = 94/500 (18%)

Query: 350 LSFDDLLTQLSAALDNDEQGLLGERIRTLYPVAMIDEFQDTDPLQYSIFSRLYLDYPQCG 409
           + FDDLL   +  L  D   +L  + +  +   ++DEFQDT+  QY I  +L   +    
Sbjct: 191 MDFDDLLFNTNV-LFRDHPDVLN-KYQQRFRYVLVDEFQDTNLSQYLITKKLAAVHQN-- 246

Query: 410 LLMIGDPKQAIYAFRGADIFTYIK-ARNQVNAHYT-LGTNWRSSAAMVAAVNQVFSSATH 467
           + ++GD  Q+IYAFRGADI   +   ++  + H   L  N+RS+  +V A N +      
Sbjct: 247 ICVVGDDAQSIYAFRGADIQNILNFEKDYPDLHVVKLEQNYRSTKNIVEAANSIIEK--- 303

Query: 468 PFIYSDDIPFQPVAASPGADKRHWSLEGQVQPALTYWWPEDLDKPQSKTDYYAQMAEACA 527
                               K  W+  G            +L K  S  +    +A    
Sbjct: 304 --------------NKAQLKKNVWTQNGNGDLI-------ELIKSASDNEEGRMVASTIF 342

Query: 528 AQIQHILTASASGAATFHRGEAIEAGDLAVLVRTGNEARMVRDALSQQGIASVYLSNRDS 587
            +                  + ++  D A+L RT +++R + +AL +  I S  +    S
Sbjct: 343 EE---------------KNNKKLQNSDFAILYRTNSQSRALEEALRKMNI-SYKIVGGLS 386

Query: 588 VFASDVAQDIERLLLAVWQPEDERLLRAAV-----ASNLFALTASELDALNNDENEWEQL 642
            +     +D+      V   +DE   +  +        L ++    + A  +D   W+ +
Sbjct: 387 FYQRKEIKDLMAYFRYVVNQDDEEAFKRIINYPKRGIGLSSVEKMMVAAYEHDIPLWQVV 446

Query: 643 I--AEFRQYRRLWSERGVLPMLR---------------AVLTQRHIAERWLAESEGERWL 685
              + F   R   S      M++               + + ++    R L E +    L
Sbjct: 447 TNSSSFLSGRASNSVSDFATMIKSFQMEVERKDAYEAASTIAKQSGLLRELYEDKTIEGL 506

Query: 686 TDYLHISELLQQATREIDSDQGLLRFLTQAMADAAQGLGGSDEQIQRLESERRLVQIVTI 745
             Y ++ ELL      +D+ +   + L   + + A  L  +D    R + E   V ++TI
Sbjct: 507 NRYENVQELLNAIKEYVDNPENEDKNLGAFLQEIAL-LTDND----RDKDEMDAVTLMTI 561

Query: 746 HKSKGLEYPLVFLPFVMSYRESSEGKYYDAESATTWVDLTGNEEALAKADQERLAEDLRL 805
           H SKGLE+  V   FV+   E                DL  ++  +    +E L E+ RL
Sbjct: 562 HSSKGLEFRQV---FVVGLEE----------------DLFPSQ--MMMQSREDLEEERRL 600

Query: 806 LYVALTRAVYGCFIGIAPLR 825
            YVA TRA+   ++  A  R
Sbjct: 601 FYVATTRAMEKLYLSYAITR 620



 Score = 33.9 bits (76), Expect = 5e-05
 Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 9/63 (14%)

Query: 21 GARLIEASAGTGKTYTIAGLYLRLVLGHGCAETRHAHPLSVDQILVVTFTEAATAELRDR 80
          G  +I A AG+GKT  +      L+        ++  P    QIL +TFT  A +E+R+R
Sbjct: 20 GPLMIIAGAGSGKTRVLTFRIAHLI------RAKNVDPF---QILALTFTNKAASEMRNR 70

Query: 81 IRR 83
          I R
Sbjct: 71 IER 73