Pairwise Alignments

Query, 1208 a.a., exodeoxyribonuclease V subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 1056 a.a., UvrD/REP helicase from Bacteroides ovatus ATCC 8483

 Score = 80.5 bits (197), Expect = 7e-19
 Identities = 121/502 (24%), Positives = 203/502 (40%), Gaps = 66/502 (13%)

Query: 359 LSAALDNDEQGLLGERIRTLYPVAMIDEFQDTDPLQYSIFSRLYLDYPQCGL--LMIGDP 416
           L   + + +   + E+I T     MIDEFQDT  +Q+  F  L L+    G   L++GD 
Sbjct: 366 LHQLVKDGDSSFVFEKIGTNIHNVMIDEFQDTSRMQWGNFKLLLLEGLSQGADSLIVGDV 425

Query: 417 KQAIYAFRGADIFTYIKARNQVNAHY-----TLGTNWRSSAAMVAAVNQVFSSATHPFIY 471
           KQ+IY +R  D +  + + N    H+     TL TN RS   ++   NQ+F++A +   Y
Sbjct: 426 KQSIYRWRNGD-WGILNSLNNHIEHFPIRVKTLATNRRSETNVIRFNNQIFTAAAN---Y 481

Query: 472 SDDIPFQPVAASPGADKRHWSLEGQVQPALTY--WWPEDLDKPQSKTDYYAQMAEACAAQ 529
            + +  Q +       ++ ++   Q  P  T   +      +P  +  Y  Q   +   +
Sbjct: 482 LNGVYKQQLGKDCEDLQKAYADVLQESPRSTEKGYVKVSFLEPDEEHGYTEQTLISLGEE 541

Query: 530 IQHILTASASGAATFHRGEAIEAGDLAVLVRTGNEARMVRDALSQQGIASVYLSNRDSVF 589
           +QH+LT+             +   D+A+LVR       + D   ++     Y    D  F
Sbjct: 542 VQHLLTSG------------VRLNDIAILVRKNKSIPRIADYFDKE---LHYKVVSDEAF 586

Query: 590 ASDVAQDIERLL--LAVWQPEDERLLRAAVASNLFALTASELDALNNDENEWEQLIAEF- 646
             D +  I  +L  L     E+ ++ RA +A        +E+     D N    L AE  
Sbjct: 587 RLDASLAICMMLDALRFLSDENNKIARAQLA----VAYQNEVLQKGLDWNTLLLLPAENY 642

Query: 647 --RQYRRLWSERGVLPMLRAVLTQRHIAERWLAESEGERWLTDYLHISELLQQATREIDS 704
               +     E  ++P+   +     I E  L + +       +  +++ LQ  + E+D 
Sbjct: 643 LPAAFLEKTKELRLMPLYELLEELFSIFEMNLIKDQDAYLFAFFDAVTDYLQSNSSELD- 701

Query: 705 DQGLLRFLTQAMADAAQGLGGSDEQIQRLESERRLVQIVTIHKSKGLEYPLVFLPFV--M 762
             G +R+  + +       G           E   ++I +IHKSKGLE+  V LPF    
Sbjct: 702 --GFIRYWDETLCSKTIPSG-----------EVEGIRIFSIHKSKGLEFHTVLLPFCDWK 748

Query: 763 SYRESSEGKYYDAESATTWVDL--------TGNEEALAKAD--QERL---AEDLRLLYVA 809
              E++    + A     +  L        T   E++   D  QERL    ++L LLYVA
Sbjct: 749 LENETNNQLVWCAPQTAPFNTLDILPINYSTQMAESIYGNDYLQERLQLWVDNLNLLYVA 808

Query: 810 LTRAVYGCFIGIAPLRNGNSSQ 831
            TRA     I     + G  S+
Sbjct: 809 FTRAGKNLIIWSRKSQKGTMSE 830



 Score = 48.9 bits (115), Expect = 2e-09
 Identities = 26/65 (40%), Positives = 43/65 (66%), Gaps = 9/65 (13%)

Query: 26 EASAGTGKTYTIAGLYLRLVLGHGCAETRHAHPLSVDQILVVTFTEAATAELRDRIRRRL 85
          +ASAG+GKT+T+A  Y++L++          +P +  QIL VTFT  ATAE+++RI  +L
Sbjct: 8  KASAGSGKTFTLAVEYIKLLI---------LNPRAYRQILAVTFTNKATAEMKERILSQL 58

Query: 86 HDARL 90
          +  ++
Sbjct: 59 YGIQI 63