Pairwise Alignments

Query, 1208 a.a., exodeoxyribonuclease V subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 796 a.a., UvrD-helicase domain-containing protein from Phocaeicola dorei CL03T12C01

 Score = 60.8 bits (146), Expect = 4e-13
 Identities = 110/523 (21%), Positives = 201/523 (38%), Gaps = 107/523 (20%)

Query: 350 LSFDDLLTQLSAALDNDEQGLLGERIRTLYPVAMIDEFQDTDPLQYSIFSRLYLDYPQCG 409
           + FDDLL        +  +  +  +    +   ++DE+QDT+  Q+SI  +L  ++ +  
Sbjct: 191 MDFDDLLLYTYMLFRDHPE--ICRKYAEQFRYVLVDEYQDTNFAQHSIVLQLTQEHQR-- 246

Query: 410 LLMIGDPKQAIYAFRGADIFTYIKARNQVNAH--YTLGTNWRSSAAMVAAVNQVFSSATH 467
           + ++GD  Q+IY+FRGA+I   +K          + L  N+RS+  +V A N +      
Sbjct: 247 VCVVGDDAQSIYSFRGANIDNILKFTQLYKGAKLFKLEQNYRSTQTIVCAANSLIEK--- 303

Query: 468 PFIYSDDIPFQPVAASPGADKRHWSLEGQVQPALTYWWPEDLDKPQSKTDYYAQMAEACA 527
                          S    K  +S + + +P   +    D+++            E  A
Sbjct: 304 --------------NSEQIKKEVFSEKAKGEPIGVFNAYSDVEE-----------GEIVA 338

Query: 528 AQIQHILTASASGAATFHRGEAIEAGDLAVLVRTGNEARMVRDALSQQGIASVYLSNRDS 587
            QI  + +            E     D A+L RT  ++R+  +AL ++ +          
Sbjct: 339 NQIVKLRSR-----------EHYSYNDFAILYRTNAQSRIFEEALRKRSLPYKIYGGLSF 387

Query: 588 VFASDVAQDIERLLLAVWQPEDERLLRAAVASNLFALTASELD-----ALNNDENEW--- 639
               ++   I    LAV  P DE   +  +   +  +  + L+     A  +  + W   
Sbjct: 388 YQRKEIKDVISYFRLAV-NPNDEEAFKRVLNYPVRGIGDTTLNKVIDAAAQHHVSLWMVL 446

Query: 640 EQLIA-----------EFRQYRRLWSERGV-LPM-----LRAVLTQRHIAERWLAESEGE 682
           E+ +A           + + +R L     V +P      L A++ ++      + +S   
Sbjct: 447 EEPLAYGLNINKGMHTKLQGFRELVKSFIVEIPKKNAYELGAMIVRQSGIMNEIYQSNDP 506

Query: 683 RWLTDYLHISELLQQ-----ATREIDSDQGLLRFLTQAMADAAQGLGGSDEQIQRLESER 737
             L+   +I EL+       A RE + ++ +L      + D    +    +Q    E + 
Sbjct: 507 ENLSRQENIEELINGMHDFCAIREEEGNENIL------LTDFLSEVSLLTDQDNEKEEDA 560

Query: 738 RLVQIVTIHKSKGLEYPLVFLPFVMSYRESSEGKYYDAESATTWVDLTGN--EEALAKAD 795
             + ++TIH +KGLE+  VF+                       V L  N    AL+   
Sbjct: 561 EKITLMTIHSAKGLEFKNVFV-----------------------VGLEENLFPSALSLNS 597

Query: 796 QERLAEDLRLLYVALTRAVYGCFIGIAPLRNGNSSQEPTSAHR 838
            + L E+ RL YVA+TRA   C++  A  R      E +S  R
Sbjct: 598 YKELEEERRLFYVAITRAEEHCYLSFAKSRFKYGKMEFSSPSR 640