Pairwise Alignments

Query, 1208 a.a., exodeoxyribonuclease V subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 723 a.a., DNA helicase II from Alteromonas macleodii MIT1002

 Score = 65.1 bits (157), Expect = 2e-14
 Identities = 114/478 (23%), Positives = 189/478 (39%), Gaps = 103/478 (21%)

Query: 379 YPVAMIDEFQDTDPLQYSIFSRLYLDYPQCGLLMIGDPKQAIYAFRGADIFT---YIKAR 435
           +   ++DEFQDT+ +QY+ + R+        ++++GD  Q+IY +RGA++     ++K  
Sbjct: 214 FRAVLVDEFQDTNNIQYA-WLRMLCSGGNNNIMIVGDDDQSIYGWRGANVDNIQHFLKDF 272

Query: 436 NQVNAHYTLGTNWRSSAAMVAAVNQVFSSATHPF---IYSDDIPFQPVAASPGADK---- 488
           N+      L  N+RS+  ++ A N V  + T      ++++D   + ++   G ++    
Sbjct: 273 NEPTT-IRLEQNYRSTGNILKAANTVIDNNTGRLGKELWTEDAQGELISVYAGFNELDEA 331

Query: 489 -------RHWSLEGQVQPALTYWWPEDLDKPQSKTDYYAQMAEACAAQIQHILTASASGA 541
                  + W  +G    ALT       +  QS+    A + E  A +I         G 
Sbjct: 332 RFIVSKIKDWLNQGN---ALTDTAILYRNNAQSRVLEEALLHEGLAYRIY-------GGL 381

Query: 542 ATFHRGEAIEA-GDLAVLVRTGNEARMVRDA-LSQQGIASVYLSNRDSVFASDVAQDIER 599
             F R E  +A G + ++    ++A   R      +GI    LS           +D  R
Sbjct: 382 RFFERQEIKDALGYMRMVSHPHDDAAFERVVNTPSRGIGEKTLSQ---------VRDTAR 432

Query: 600 L-LLAVWQP------EDERLLRAAVASNLFALTASELDALNNDENEWEQLIAEFRQYRRL 652
           +   ++WQ       E     RA  A   F L  +EL+    DE   +Q     RQ    
Sbjct: 433 MHNCSMWQACQLLINEGGFKGRALNAMQSFVLLITELEQSTLDEPLDQQADKAIRQ---- 488

Query: 653 WSERGVLPMLRAVLTQRHIAERWLAESEGERWLTDYLHISELLQQ-----ATREIDSDQG 707
               G+  M +A                GE+      ++ EL+          E +    
Sbjct: 489 ---SGLYAMYQA--------------ERGEKAQARLENLEELVTACKTFIVPEEAEEMSP 531

Query: 708 LLRFLTQAMADAAQGLGGSDEQIQRLESERRLVQIVTIHKSKGLEYPLVFLPFVMSYRES 767
           L  FL  A  +A +     D+           VQ++TIH +KGLE+PLVFL  V      
Sbjct: 532 LAAFLAHASLEAGETQADKDQD---------AVQMMTIHTAKGLEFPLVFLAGV------ 576

Query: 768 SEGKYYDAESATTWVDLTGNEEALAKADQERLAEDLRLLYVALTRAVYGCFIGIAPLR 825
            EG +           +T +E         R+ E+ RL YV +TRA+   +I  A  R
Sbjct: 577 EEGMFPS--------QMTNDEPG-------RMEEERRLCYVGMTRAMQKLYITYAESR 619