Pairwise Alignments

Query, 1208 a.a., exodeoxyribonuclease V subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 679 a.a., ATP-dependent DNA helicase Rep from Acinetobacter radioresistens SK82

 Score = 60.1 bits (144), Expect = 6e-13
 Identities = 117/524 (22%), Positives = 206/524 (39%), Gaps = 116/524 (22%)

Query: 350 LSFDDLLTQLSAALDNDEQGLLGERIRTLYPVAMIDEFQDTDPLQYSIFSRLYLDYPQCG 409
           + FDDL+   +  L  + +  + ++ +      ++DE+QDT+  QY +   L     Q  
Sbjct: 188 VDFDDLIVMPTRLLQENAE--VRDKWQNRVRYLLVDEYQDTNTAQYILVKLLVGVMGQ-- 243

Query: 410 LLMIGDPKQAIYAFRGA--DIFTYIKARNQVNAHYTLGTNWRSSAAMVAAVNQVFSSATH 467
              +GD  Q+IYA+RGA  +    ++          L  N+RS++ ++ + N V ++  H
Sbjct: 244 FTAVGDDDQSIYAWRGAKPENMALLQQDFPNLKVIKLEQNYRSTSRILKSANAVIANNPH 303

Query: 468 PFIYSDDIPFQPVAASPGADKRHWSLEGQVQPALTYWWPEDLDKPQSKTDYYAQMAEACA 527
            F                 DK+ WS +G            D D+ +              
Sbjct: 304 IF-----------------DKQLWSDKGHGDVIRVITCRNDDDEAE-------------- 332

Query: 528 AQIQHILTASASGAATFHRGEAIEAGDLAVLVRTGNEARMVRDALSQQGIASVYLSNRDS 587
             ++ ILT     A ++         D AVL R   +AR++   L Q  I    LS   S
Sbjct: 333 RVVKDILTHKLMNARSWK--------DYAVLYRGNFQARVLETQLRQMQI-PYKLSGGQS 383

Query: 588 VFASDVAQDIERLLLAVWQPED--------------------ERLLRAAVASNLFALTAS 627
            FA    +D+   L  +  PED                    E+L   A  ++L  L+A+
Sbjct: 384 FFARAEIKDVMSYLRLIINPEDDSAFLRIINTPKRAIGPVTLEKLGLFAQDNHLSLLSAA 443

Query: 628 ELDALN--------NDENEWEQLIAEFRQYRRLWSERGVLPMLRAVLTQR----HIAERW 675
               L            +E+   I  F   R L  +   +P +R ++ +     +I E+ 
Sbjct: 444 GDQRLTMVIPKKAVTQLHEFADFIGNFT--RELLDDDEPVPKIRQMMNEAGYIDYIREQA 501

Query: 676 LAESEGERWLTD----YLHISELLQQATREIDSDQGLLRFLTQAMADAAQGLGGSDEQIQ 731
              ++ +  L +    Y  I  L+ +A    D D   +  + + M      L    EQ Q
Sbjct: 502 ATPAQEKSKLDNIESLYSSIQSLINRAE---DVDDKNIESVIRKMV-----LLDMLEQ-Q 552

Query: 732 RLESERRLVQIVTIHKSKGLEYPLVFLPFVMSYRESSEGKYYDAESATTWVDLTGNEEAL 791
           + E +   V ++T+H +KGLE+P V++   +   E                +L  ++ ++
Sbjct: 553 QEEEDIDKVNLLTLHAAKGLEFPYVYM---IGLEE----------------ELLPHKNSI 593

Query: 792 AKADQERLAEDLRLLYVALTRAVYGCFIGIAPLR-NGNSSQEPT 834
           A    E + E+ RL+YV +TRA     + +A  R NG   ++ T
Sbjct: 594 A---SETIEEERRLMYVGITRARQALTLTLAEQRKNGGQMKQMT 634