Pairwise Alignments

Query, 706 a.a., exodeoxyribonuclease V subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 613 a.a., exodeoxyribonuclease V subunit alpha from Pantoea agglomerans CFBP13505 P0401

 Score =  499 bits (1285), Expect = e-145
 Identities = 317/710 (44%), Positives = 405/710 (57%), Gaps = 125/710 (17%)

Query: 8   VAKRLLAQGALRPLDVQFARFIGKQAVLAGHNAAESELLSVLSAA-LSAELGRGHICLPL 66
           V KRLL     RPLD+QFA+ +          A ES+   +L+AA +SA+ G GH+CLPL
Sbjct: 12  VEKRLL-----RPLDIQFAQLV----------APESQPGLLLAAACVSADAGEGHVCLPL 56

Query: 67  ---CDAQ---GNRCDLAALIGLYGEASLQHSERWLA--VDWQALLQASPLVGQQGEAVPL 118
              C+A    G +  LA  I     A     E W A   DW A+   S +        PL
Sbjct: 57  SNLCEANLFAGRQPALAQAIWQAAGAP----EDWPARFADWSAVSDGSLVT-------PL 105

Query: 119 MFDGSRLYLHRYWHYEKQLAARLTELAAPQRLSPA-ELANLRERLNTLFARDYLGLWQAL 177
           +    RLYLHR W  E     R+ +  A Q +  A ++    + LN+LF           
Sbjct: 106 VLSNQRLYLHRLWQSE----GRVADFFAAQEVKTAFDMHAAGDVLNSLF----------- 150

Query: 178 QQKPLSSVERIQLLNDRLDVVESDALDWPAIEAVVEKAQRAADLQALEQLIPLTHCLNWQ 237
                                +    +W  I A V   ++ A                  
Sbjct: 151 ---------------------DDQPENWQKIAAAVALTRKTA------------------ 171

Query: 238 KVAAAVALTRRFAVISGGPGTGKTTTVTKLLAALISQSMAQGKVPEIKLIAPTGKAAARL 297
                        VISGGPGTGKTTTV KLLAALI  +        I+L APTGKAAARL
Sbjct: 172 -------------VISGGPGTGKTTTVAKLLAALIRLNPG---ALRIQLAAPTGKAAARL 215

Query: 298 TESMGKAVSQLAIEPEIAAAIPSSSSTIHRLLGAIPGSAEFRHHTRNPLHLDLLVVDEAS 357
           TES+G A+ +LA+  E     P+ ++T+HRLLGA P +   R+H  NPLHLD+LVVDEAS
Sbjct: 216 TESLGSALQELAVSDEERRRFPAEATTLHRLLGAQPDTQRLRYHAGNPLHLDVLVVDEAS 275

Query: 358 MVDLPLMVKLVEALPKHARLILLGDKDQLASVEAGAVLGDICTFLNQGYGHEQGAQLAEL 417
           MVDL +M KL+ ALP HAR++ LGD+DQLASVEAGAVLGDIC     GY   +  QL  L
Sbjct: 276 MVDLSMMAKLIAALPAHARVVFLGDRDQLASVEAGAVLGDICRCTESGYSLARAEQLGLL 335

Query: 418 TGFATLRQTASKTVNPVADCLCMLQKSYRFDARSGIGQLAKAINSGSPARVEAVWQQSFS 477
           TG  TL+ +       V D +C+LQKSYRFD  SGIGQLAKAIN G   +V AV+  ++ 
Sbjct: 336 TG-CTLQGSDDVQAPAVRDSICLLQKSYRFDDSSGIGQLAKAINRGDAEQVRAVFAAAYQ 394

Query: 478 DIEHFAL-SGEHYQQLLQTLVQAYRPYLSLLNQPTEQFESTQQSMLTLAKSALDAFSRCR 536
           DI +  L S + YQ +L  + Q Y+P+L L+ Q     E             + AF R +
Sbjct: 395 DISYQPLNSADAYQAMLDEVAQGYQPFLQLIRQQAPPAE------------VIAAFGRYQ 442

Query: 537 LLCALREGDFGVMGLNTRIERALNAHKLIKT--QEEIWYHGRPIMVTRNDHGLGLYNGDI 594
           LLCALR+G FGV GLN RIE+ L   + I+       WY GRP+M+TRND  LGL+NGDI
Sbjct: 443 LLCALRDGPFGVQGLNQRIEQRLMQLQRIRRPGMGSRWYEGRPVMITRNDSALGLFNGDI 502

Query: 595 GLCMRDRDDDQGRLKVYFELPDGSIKAVLPSRVPQHETAYAMTIHKSQGSEFDLTLLILP 654
           G+ MR   D++G LKV+F LPDGSIKA+ PSR+P HETA+AMT+HKSQGSEFD T L++P
Sbjct: 503 GMTMR---DEEGNLKVFFPLPDGSIKAIQPSRLPSHETAWAMTVHKSQGSEFDHTALVMP 559

Query: 655 PDYSPILTRELVYTGITRAKKQLKLYCDNKVLQRAIKVKTQRASGLVARL 704
             + P+LTRELVYT ITRA++QL +Y +  V QRA++++TQR SGLV RL
Sbjct: 560 TQFLPVLTRELVYTAITRARRQLNIYSEPGVFQRAVQLQTQRRSGLVERL 609