Pairwise Alignments

Query, 706 a.a., exodeoxyribonuclease V subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 606 a.a., DNA helicase/exodeoxyribonuclease V, alpha subunit (EC 3.1.11.5) from Enterobacter asburiae PDN3

 Score =  526 bits (1356), Expect = e-154
 Identities = 321/696 (46%), Positives = 411/696 (59%), Gaps = 109/696 (15%)

Query: 15  QGALRPLDVQFARFIGKQAVLAGHNAAESELLSVLSAALSAELGRGHICLPLCDAQGNRC 74
           Q  LR LDVQFA  +          A E   + + +A LS + G GH+CLPL     +  
Sbjct: 13  QRLLRHLDVQFAMMV----------AGEEPAVMLAAAILSKDAGEGHVCLPLSRLAVDEK 62

Query: 75  ---DLAALIGLYGEASLQHSERWLAVDWQALLQASPLVGQQGEAVPLMFDGSRLYLHRYW 131
               L A   L G+A          VDWQ +L  SP V       P++  G RLYL+R W
Sbjct: 63  MPPALQACFALLGDA----------VDWQEILLGSPAVSGADTGTPMILVGERLYLNRLW 112

Query: 132 HYEKQLAARLTELAAPQRLSPAELANLRERLNTLFARDYLGLWQALQQKPLSSVERIQLL 191
             E  +A   +E  AP    P + A LR+ L+TLF  D                      
Sbjct: 113 RNELTVARFFSETNAP---LPCDEAQLRQTLDTLFTSD---------------------- 147

Query: 192 NDRLDVVESDALDWPAIEAVVEKAQRAADLQALEQLIPLTHCLNWQKVAAAVALTRRFAV 251
                    DA DW                               QKVAAAVALTRR +V
Sbjct: 148 ---------DATDW-------------------------------QKVAAAVALTRRISV 167

Query: 252 ISGGPGTGKTTTVTKLLAALISQSMAQGKVPEIKLIAPTGKAAARLTESMGKAVSQLAIE 311
           ISGGPGTGKTTTV KLLAALI  S  Q     I+L APTGKAAARLTES+G A+ +L + 
Sbjct: 168 ISGGPGTGKTTTVAKLLAALIQLSSEQ--KCRIRLAAPTGKAAARLTESLGGALQKLPLT 225

Query: 312 PEIAAAIPSSSSTIHRLLGAIPGSAEFRHHTRNPLHLDLLVVDEASMVDLPLMVKLVEAL 371
            E  A  P+ +ST+HRLLGA PGS   R+H  NPLHLD+LVVDEASM+DL +M +L++AL
Sbjct: 226 REQLALFPNEASTLHRLLGAQPGSQRLRYHAGNPLHLDVLVVDEASMIDLTMMSRLIDAL 285

Query: 372 PKHARLILLGDKDQLASVEAGAVLGDICTFLNQGYGHEQGAQLAELTGFATLRQTASKTV 431
           P HAR+I LGD+DQLASVEAGAVLGDICT+ + GY  E+  +LA LTG  +L        
Sbjct: 286 PPHARVIFLGDRDQLASVEAGAVLGDICTYASLGYTAERAQELARLTG-CSLTSENHSLA 344

Query: 432 NPVADCLCMLQKSYRFDARSGIGQLAKAINSGSPARVEAVWQQSFSDIEHFAL-SGEHYQ 490
             + D LC+LQKSYRF + SGIGQLA A+N G      AV+  +F+DIE  +L SGE YQ
Sbjct: 345 GALRDSLCLLQKSYRFGSDSGIGQLAAAVNRGDRRTTTAVFDGTFTDIEKKSLQSGEEYQ 404

Query: 491 QLLQTLVQAYRPYLSLLNQPTEQFESTQQSMLTLAKSALDAFSRCRLLCALREGDFGVMG 550
            +L   +Q Y+ +L+ + Q     +ST + ++        AF   +LLCALREG FGV G
Sbjct: 405 AMLDDALQGYQHFLTGVQQ-----QSTPEQVIA-------AFGEYQLLCALREGPFGVRG 452

Query: 551 LNTRIERAL-NAHKLIKTQEEIWYHGRPIMVTRNDHGLGLYNGDIGLCMRDRDDDQGRLK 609
           LN R+E+ L    K+ +T    WY GRP+M++RND  LGL+NGDIG+ +   D  QG L+
Sbjct: 453 LNDRLEQLLAQKRKINRTPHSRWYEGRPVMISRNDSTLGLFNGDIGIAL---DCGQG-LR 508

Query: 610 VYFELPDGSIKAVLPSRVPQHETAYAMTIHKSQGSEFDLTLLILPPDYSPILTRELVYTG 669
           V+F++PDGS+K+  PSR+P+HETA+AMT+HKSQGSEF+   LILP   SP++TREL+YT 
Sbjct: 509 VWFQMPDGSVKSFQPSRLPEHETAWAMTVHKSQGSEFNHAALILPTQLSPVITRELIYTA 568

Query: 670 ITRAKKQLKLYCDNKVLQRAIKVKTQRASGLVARLE 705
           ITRA+++L LY D +VL +AI  +T+R SGL A  E
Sbjct: 569 ITRARQRLSLYADERVLVQAIATRTERRSGLGAIFE 604