Pairwise Alignments

Query, 706 a.a., exodeoxyribonuclease V subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 375 a.a., exodeoxyribonuclease V from Agrobacterium fabrum C58

 Score = 47.8 bits (112), Expect = 1e-09
 Identities = 39/128 (30%), Positives = 59/128 (46%), Gaps = 24/128 (18%)

Query: 575 GRPIMVTRNDHGLGLYNGD---------------IGLCMRDRDDDQGR-------LKVYF 612
           G  ++  RND   GL NG                I L +R  DDD  R       LK  F
Sbjct: 247 GDKLVCLRNDPAKGLLNGSLWQVMSSSRETVKPGINLMIRPEDDDMDRGAAKIKLLKAAF 306

Query: 613 ELPDGSIKAVLPSRVPQHETAYAMTIHKSQGSEFDLTLLILPPDYSPILTRE-LVYTGIT 671
           E  +  I      R  + +  YA+T+HK+QGS+++  +++    Y+   +RE  +YT IT
Sbjct: 307 EDVETEIPWSTRKRYDEFDFGYALTVHKAQGSQWN-NVVLFDESYAFRDSRERWLYTAIT 365

Query: 672 RAKKQLKL 679
           RA + L +
Sbjct: 366 RAAETLTI 373



 Score = 33.9 bits (76), Expect = 1e-05
 Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 22/143 (15%)

Query: 254 GGPGTGKTTTVTKLLAALISQSMAQGKVPEIKLIAPTGKAAARLTE---SMGKAVSQLAI 310
           G  GTGKTT         +++  A+    E+   A TGKAA  L     +  + +  L  
Sbjct: 30  GYAGTGKTT---------LAKHFAENVDGEVLFAAFTGKAAQVLRSRGATNARTIHSLIY 80

Query: 311 EPEIAAAIPSSSSTIHRLLGAIPGSAEFRHHTRNPL-HLDLLVVDEASMVDLPLMVKLVE 369
            P     +    +      G    +  F  + ++PL    L+++DE SMVD  L   L+ 
Sbjct: 81  RPRGEETVEDEET------GKTSVAPMFSINRQSPLAKAALIIIDECSMVDEQLGKDLMS 134

Query: 370 ALPKHARLILLGDKDQLASVEAG 392
                  +++LGD  QL  V  G
Sbjct: 135 F---GTPILVLGDPGQLPPVSGG 154