Pairwise Alignments

Query, 706 a.a., exodeoxyribonuclease V subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 602 a.a., RecBCD enzyme subunit RecD from Acinetobacter radioresistens SK82

 Score =  243 bits (621), Expect = 2e-68
 Identities = 198/621 (31%), Positives = 298/621 (47%), Gaps = 149/621 (23%)

Query: 117 PLMFDGSRLYLHRYWHYEKQLAARLTELAAPQRLSPAELANLRERLNTLFARDYLGLWQA 176
           P +FDGS LYL+RYW+                             L T  A+    LWQ 
Sbjct: 96  PFIFDGSSLYLYRYWN-----------------------------LETRLAKQIERLWQQ 126

Query: 177 LQQKPLSSVERIQLLNDRLDVVESDALDWPAIEAVVEKAQRAADLQALEQLIPLTHCLNW 236
            Q  P+       LL D+                                         +
Sbjct: 127 -QIPPVDLTAYSGLLQDK-----------------------------------------Y 144

Query: 237 QKVAAAVALTRRFAVISGGPGTGKTTTVTKLLAALISQSMAQGKVPEIKLI--APTGKAA 294
           QK A  +   +  ++I+GGPGTGKT T+ +++A L         +P+I++   APTGKAA
Sbjct: 145 QKSALTMVAGKILSMITGGPGTGKTYTLARIIAVL------NQVIPDIRIAMAAPTGKAA 198

Query: 295 ARLTESMGKAVS--QLAIEPEIAAAIP-SSSSTIHRLLGAIPGSAEFRHHTRNPLHLDLL 351
            R+ E++  +    +L     +  ++   ++ TIHRLLG +  + + R H+R PL  D++
Sbjct: 199 QRMQEALRHSFQDPKLLESGLVTQSLQMQTTQTIHRLLG-LGQNQQPRFHSRQPLPYDVI 257

Query: 352 VVDEASMVDLPLMVKLVEALPKHARLILLGDKDQLASVEAGAVLGDICTFLNQGYGHEQG 411
           V+DEASM+DL L   L EA+P H RLILLGD  QLASVE G+VL D+             
Sbjct: 258 VIDEASMLDLELATLLFEAIPDHCRLILLGDAQQLASVEVGSVLADL------------- 304

Query: 412 AQLAELTGFATLRQTASKTVNPVADCLCMLQKSYRFDARSGIGQLAKAIN---SGSP-AR 467
                            + +  +A+    L  S RF   + IG++AK I    +G P   
Sbjct: 305 -----------------QQIPALAEHRVHLVNSRRFTEDALIGKMAKFIQQFQAGKPHTE 347

Query: 468 VEAVWQQSF---SDIEHFALSGE-----------------HYQQLLQTLVQAYRPYLSLL 507
           +   +QQ     + +    LS +                 ++ +  + L+Q Y PYL  L
Sbjct: 348 ILDYFQQQIVPANQLSAITLSHDMQDQVQLEFLPASAQSLNWTEFYEKLMQGYLPYLKAL 407

Query: 508 NQPTEQFESTQQSMLTLAKSALDAFSRCRLLCALREGDFGVMGLNTRIERALN-AHKLIK 566
               +  E+++ ++    K  + AF   RLL A R G  G+  LN   ++ LN A K I 
Sbjct: 408 KNYLQAEETSEDTV----KPLVQAFDHYRLLAATRHGALGLEKLNQYAKQWLNQALKTIA 463

Query: 567 TQEEIWYHGRPIMVTRNDHGLGLYNGDIGLCMRDRDDDQGRLKVYFELPDGSIKAVLPSR 626
             +  WY GRP+M+T ND+ LGL NGDIG+C+R R+    + +VYF   +   K V  +R
Sbjct: 464 VGD--WYIGRPVMMTYNDYQLGLSNGDIGICVRHREHPD-QFEVYFPSLN---KWVAATR 517

Query: 627 VPQH-ETAYAMTIHKSQGSEFDLTLLILPPDYSPILTRELVYTGITRAKKQLKLYCDNKV 685
           +P++ ETA+A+TIHKSQGSEF  T ++L      +L++EL+YT ITRAKK + L  D + 
Sbjct: 518 LPKNIETAFALTIHKSQGSEFTHTTVVLDQTAKNLLSQELIYTAITRAKKVVSLLVDPEA 577

Query: 686 LQRAIKVKTQRASGLVARLEQ 706
             +++ VKT R SGLV+++ +
Sbjct: 578 FVQSLTVKTTRKSGLVSKINR 598