Pairwise Alignments

Query, 368 a.a., murein transglycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 421 a.a., Membrane-bound lytic murein transglycosylase A from Sphingobium sp. HT1-2

 Score =  110 bits (275), Expect = 7e-29
 Identities = 84/279 (30%), Positives = 132/279 (47%), Gaps = 47/279 (16%)

Query: 90  ATLAQFG---IQAAQLGGGDKQGNVLFTGYFSPVIELRHQPDSVFKYPVYGLP------- 139
           AT A+F     +A Q+G    +G    TGY+ P I         ++ P+Y  P       
Sbjct: 137 ATAAEFFSRYFEAVQVG----EGKAFVTGYYEPEIAGSRTRQPGYQVPIYRRPAELIDVN 192

Query: 140 -----------------KCNKNCP--TRAEIYQGALDGQGLELGYAENLIDPFIMEVQGS 180
                            + +   P   R++I  G+L G+GLEL +A + ++ F ++VQGS
Sbjct: 193 LGLFSDSLKGRTIRGKVQGSNFVPFDERSQIVDGSLSGRGLELAWAADPVEFFFLQVQGS 252

Query: 181 GFVHFGDDDTLEYFAYAGKNNKAYVSIGKVLIERGLVEREKMSLKAIKDWVLANDEATVR 240
           G +   D   +    Y G+N + Y  IGK++ +RGL++    S++ I  ++ A+  A   
Sbjct: 253 GRLTLPDGGVMR-IGYDGQNGRDYTGIGKLMKDRGLIQAG--SMQDIMQYLRAHP-AEGA 308

Query: 241 ELLEENPSFVFFKPSAAAPVKGSAGIPLLPMASVAGDRSILPMGTPILAEVPLLNADGTW 300
            ++ EN SFVFF+    A   G+ G+P+   A+VA D   +P+G P+L  +     +G W
Sbjct: 309 AIMNENKSFVFFRELTGAGPIGALGVPVTAEATVAADPKYIPLGAPVLLSLDRAEPNGIW 368

Query: 301 SGAHQLRLLIVLDTGGAVK-QNHLDLYHGMGPRAGLEAG 338
                    I  DTGGA+K  N  D + G G RA   AG
Sbjct: 369 ---------IAQDTGGAIKGANRFDSFWGAGDRARGIAG 398