Pairwise Alignments

Query, 368 a.a., murein transglycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 365 a.a., Membrane-bound lytic murein transglycosylase from Enterobacter asburiae PDN3

 Score =  333 bits (853), Expect = 6e-96
 Identities = 167/351 (47%), Positives = 234/351 (66%), Gaps = 6/351 (1%)

Query: 2   SKRLLSLASLALLFGCAQQPNDRAQQYQQQTFPH---ILNRADVVESNKPRDYTEFSKQS 58
           +K L++ A +A+L  C+ +P DR QQY+         ++N+ D V +  P +  +FS+Q 
Sbjct: 6   AKYLMAGAMVAILAACSSKPTDRGQQYKDGKLSQPFSLVNQPDAVGA--PINAGDFSEQV 63

Query: 59  ELVVQGSASMAKIYRPLYEQLNEWVLQSGDPATLAQFGIQAAQLGGGDKQGNVLFTGYFS 118
             +   S  +      +Y  + +W+   GD   + QFGI A Q+ G D  GNV FTGY++
Sbjct: 64  YQIRNASPRLYGTQSSVYNAVQDWLKAGGDTRNMRQFGIDAWQMEGADNYGNVQFTGYYT 123

Query: 119 PVIELRHQPDSVFKYPVYGLPKCNKNCPTRAEIYQGALDGQGLELGYAENLIDPFIMEVQ 178
           PVI+ RH     F+YP+Y +P      P+RAEIY GAL  +   L Y+ +L+D FIM+VQ
Sbjct: 124 PVIQARHSRQGEFQYPIYRMPPKRGRLPSRAEIYAGALS-ENYVLAYSNSLMDNFIMDVQ 182

Query: 179 GSGFVHFGDDDTLEYFAYAGKNNKAYVSIGKVLIERGLVEREKMSLKAIKDWVLANDEAT 238
           GSG++ FGD   L +F+Y+GKN  AY SIGKVLI+RG V++E MS++AI++W   + EA 
Sbjct: 183 GSGYIDFGDGSPLNFFSYSGKNGHAYRSIGKVLIDRGEVKKEDMSMQAIREWGEKHSEAE 242

Query: 239 VRELLEENPSFVFFKPSAAAPVKGSAGIPLLPMASVAGDRSILPMGTPILAEVPLLNADG 298
           VRELLE+NPSFVFFKP   APVKG++ +PL+  ASVA DRSI+P GT +LAEVPLL+ +G
Sbjct: 243 VRELLEQNPSFVFFKPQNFAPVKGASAVPLIGRASVASDRSIIPAGTTLLAEVPLLDNNG 302

Query: 299 TWSGAHQLRLLIVLDTGGAVKQNHLDLYHGMGPRAGLEAGHYKHFGRVWKL 349
            ++G ++LRL++ LD GGA+K  H D+Y G+GP AG  AG Y H+GRVW L
Sbjct: 303 KFNGQYELRLMVALDVGGAIKGQHFDIYQGIGPDAGHRAGWYNHYGRVWVL 353