Pairwise Alignments

Query, 266 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 248 a.a., Nucleoside-binding outer membrane protein from Pseudomonas fluorescens GW456-L13

 Score = 52.0 bits (123), Expect = 1e-11
 Identities = 43/182 (23%), Positives = 79/182 (43%), Gaps = 19/182 (10%)

Query: 82  KSSDKVGDPKIFMKFAPRMSLDAFTGVDMSFGPVQEVYVASLFEWDGTDFKTNAFSVNNQ 141
           K     G+   + +F PR+S        + FGP+++V +A  +E+   D         + 
Sbjct: 63  KEDHFAGENTHYGEFQPRLSFGKIFDQKLEFGPIKDVLLAMTYEFGEDD-------TESY 115

Query: 142 KIGLGSDVMVPWFGKVGLNLYGTY-DGNRKDWNGFQISTNWFKPFYFFENGSFISYQGYI 200
            +G G D+ +P F    LN Y  + +G R   + +QI+  W   +     GS +   G++
Sbjct: 116 LVGPGFDLAIPGFDYFQLNFYNRHTEGGRPGDDVWQITPVW--SYTIPVGGSDVLIDGFM 173

Query: 201 DY----QFGLKDEYSTASNGGA-----MFNGIYWHSDRFAVGYGLKGYKDVYGIKDTDGF 251
           D+        K EY    +        +   +   + +  VG     +K+ YGI+D++GF
Sbjct: 174 DWVVDNDVNSKGEYHANLHFNPQVKYDLGKALNLGAKQLYVGVEYDYWKNKYGIEDSEGF 233

Query: 252 KS 253
           K+
Sbjct: 234 KT 235