Pairwise Alignments

Query, 266 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 261 a.a., membrane protein from Pseudomonas simiae WCS417

 Score = 58.5 bits (140), Expect = 1e-13
 Identities = 48/195 (24%), Positives = 81/195 (41%), Gaps = 19/195 (9%)

Query: 82  KSSDKVGDPKIFMKFAPRMSLDAFTGVDMSFGPVQEVYVASLFEWDGTDFKTNAFSVNNQ 141
           K    VG    + + +PR+S       D+SFGP+++V +A  +E+   D +       + 
Sbjct: 76  KEDGNVGPSTYYGEISPRLSFGKIFDKDLSFGPIKDVLLAFTYEFGEGDNE-------SY 128

Query: 142 KIGLGSDVMVPWFGKVGLNLYGTY-DGNRKDWNGFQISTNWFKPFYFFENGSFISYQGYI 200
            +G G D+ +P F    LN Y    +GNR     +QI+  W   +      S I   G++
Sbjct: 129 LLGPGFDLNIPGFDYFQLNFYQRQTEGNRPGDGVWQITPVW--SYTIPVGNSNILIDGFM 186

Query: 201 DYQFGLKDEYSTASNGGAMFN---------GIYWHSDRFAVGYGLKGYKDVYGIKDTDGF 251
           D+            +    FN          ++W   +  VG+    +K+ YGI+D+  F
Sbjct: 187 DWVVDNDKNARGTYHANLHFNPQVKYDLGKALHWGDKQLYVGFEYDYWKNKYGIEDSGAF 246

Query: 252 KSTGFGHYVAVTYKF 266
           K+        V Y F
Sbjct: 247 KTNQDTASFLVKYHF 261