Pairwise Alignments

Query, 266 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 287 a.a., Nucleoside-specific channel-forming protein Tsx precursor from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  105 bits (263), Expect = 8e-28
 Identities = 90/292 (30%), Positives = 139/292 (47%), Gaps = 31/292 (10%)

Query: 1   MRKSLLALSL-LAATSAPVLAADYSDGDIHKNDYKWMQFNLMGAFDEL--PGKSSHDYLE 57
           M+K+LLA+S  LA TS+    A  +D   + +D+     N++G++     P  ++  YLE
Sbjct: 1   MKKTLLAVSAALALTSSFTANAAENDQPQYLSDWWHQSVNVVGSYHTRFSPKLNNDVYLE 60

Query: 58  MEFGGRSGIFDLYGYVDV-----FNLATNKSSDKVGDPKIFMKFAPRMSLDAFTGVDMSF 112
            E   +   FD YGY+D+     +    +K     G P +FM+  PR S+D  TG D+SF
Sbjct: 61  YEAFAKKDWFDFYGYIDIPKTFDWGNGNDKGIWSDGSP-LFMEIEPRFSIDKLTGADLSF 119

Query: 113 GPVQEVYVASLFEWDGTDFKTNAFSVNNQKIGLGSDVMVPWFGKVGLNLYGTYD------ 166
           GP +E Y A+ + +D  D K +  S     +GLG+D+       + LN+Y  Y       
Sbjct: 120 GPFKEWYFANNYIYDMGDNKASRQS--TWYMGLGTDIDTGLPMGLSLNVYAKYQWQNYGA 177

Query: 167 GNRKDWNGFQISTNWFKPFYFFENGSFISYQGYIDYQFG--LKDEYSTASNGGA-----M 219
            N  +W+G++    +F P      G  +SY G+ ++ +G  L D+ +  SN  A      
Sbjct: 178 SNENEWDGYRFKVKYFVPITDLWGGK-LSYIGFTNFDWGSDLGDDPNRTSNSIASSHILA 236

Query: 220 FNGIYWHSDRFA-----VGYGLKGYKDVYGIKDTDGFKSTGFGHYVAVTYKF 266
            N  +WH    A      G    G K  +G  D    KSTG+G Y+ V Y F
Sbjct: 237 LNYDHWHYSVVARYFHNGGQWQNGAKLNWGDGDFSA-KSTGWGGYLVVGYNF 287