Pairwise Alignments

Query, 266 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 287 a.a., nucleoside-specific channel-forming protein Tsx from Dickeya dianthicola ME23

 Score = 78.2 bits (191), Expect = 2e-19
 Identities = 75/294 (25%), Positives = 127/294 (43%), Gaps = 35/294 (11%)

Query: 1   MRKSLLALSLLAAT-SAPVLAADYSDGDIHKNDYKWMQFNLMGAFDELPGKSSHD--YLE 57
           M+K L A ++   + S P LA   S    + +D+     N++G++    G   ++  YLE
Sbjct: 1   MKKILAACAISTLSYSLPTLADGNSPQ--YLSDWWHQSINVVGSYHTRFGPQLNNDLYLE 58

Query: 58  MEFGGRSGIFDLYGYVDVFNL-ATNKSSDK----VGDPKIFMKFAPRMSLDAFTGVDMSF 112
            E       FD YGY+DV  +     + D+     G P +FM+  PR S++  T   + F
Sbjct: 59  YEAFAHKDWFDFYGYIDVPRVFGAGNTPDRGIWNKGSP-LFMEIEPRFSINKLTNTQLGF 117

Query: 113 GPVQEVYVASLFEWDGTDFKTNAFSVNNQKIGLGSDVMVPWFGKVGLNLYGTYDG----- 167
           GP +E YVA+   +D    + N    +   +GLG+D+       +  N+Y  Y       
Sbjct: 118 GPFKEWYVANNIIYD--QGRNNDSRQSTWYVGLGTDINTGTDLSLSANIYAKYQWQNYSA 175

Query: 168 -NRKDWNGFQISTNWFKPFYFFENGSFISYQGYIDYQFG---------LKDEYSTASNGG 217
            N   W+G++    +F P      G  ++Y G+ ++ FG          +   + AS+  
Sbjct: 176 LNEDRWDGYRFKIKYFYPITSLWGGK-LTYIGFTNFDFGSDLANAAGPSRTSNAIASSHI 234

Query: 218 AMFNGIYWHSDRFA-----VGYGLKGYKDVYGIKDTDGFKSTGFGHYVAVTYKF 266
              N  +WH    A      G    G +  +G +     +STG+G+Y+   Y F
Sbjct: 235 LALNYDHWHYSVVARYFHNGGQWADGTELDFG-RGPFNARSTGWGYYLVAGYNF 287