Pairwise Alignments

Query, 194 a.a., RNA polymerase subunit sigma from Vibrio cholerae E7946 ATCC 55056

Subject, 184 a.a., RNA polymerase sigma factor from Dickeya dianthicola ME23

 Score = 63.9 bits (154), Expect = 2e-15
 Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 1/160 (0%)

Query: 32  VFSYYSPKLKQFVMKHVGSEQVALELVQETMSTVWQKASLFDGQKSSLATWIYTIARNLS 91
           VF  +  +L+ F+ K V + +   +L Q T   V +    F G  S   TW++ IA NL 
Sbjct: 26  VFRLHGKRLQNFIRKRVSNREDVEDLQQMTYLEVLKNREKFAGA-SRPETWVFGIALNLV 84

Query: 92  YDLLRRQKGRDAYVLADDIWPEDYCPPDLVDHYAPEQDLLKEQVMKFLDRLPEAQQQVIK 151
            +  ++ + R   +  D +   +    D+      E D    + +     LPE  ++++ 
Sbjct: 85  RNHFKQARYRIVEISDDALEVAEILSTDIDPSRITECDHSLNRALAASAHLPEETRKMLM 144

Query: 152 AVYLEEIPQQDVADMLDIPLGTVKSRLRLAVEKLRLSMDA 191
            +   ++  QD+A+ L+IP+GTV+SRL  A   LR ++DA
Sbjct: 145 MLLDADVSYQDIAEQLNIPIGTVRSRLSRARGYLRQAVDA 184