Pairwise Alignments

Query, 226 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 231 a.a., Anti-sigma-E factor ChrR from Xanthobacter sp. DMC5

 Score = 99.4 bits (246), Expect = 5e-26
 Identities = 69/212 (32%), Positives = 104/212 (49%), Gaps = 18/212 (8%)

Query: 2   SYHPNYALLAAYAEGGLDSAHGLAISAHLEICPHCRDLVHEIEAELGELLNQQAASSVAL 61
           S HP    L  YA G L +   L +  HLE CP CR  V  + +  G LL  +A   +AL
Sbjct: 4   STHPGTETLLRYAAGTLPAGPRLLVDVHLEGCPECRATVARLMSVGGALL--EACEPLAL 61

Query: 62  SDDANWQAMF---------DSIVALPQQAASNTPVKTTPVMVTVNGKQIAIPKVLARLVK 112
           + DA  +A+          +       +AA  TP K  P+     G ++    VL   + 
Sbjct: 62  APDALDRALARLDRPSTRRNPAALHHAEAAGATPPKRWPLP---EGLKLPPGVVLPPAIA 118

Query: 113 PEQQWR----SYGGKVFSLPLQSEDNVRMNLMYISQGVSIPQHTHKGFESTLVLHGGFSD 168
             +  R    + G ++  + L+ + + ++ L  I+ G +IPQHTH G E T V+ GGFSD
Sbjct: 119 SRRIGRLVPVAPGVRLGLVHLEEDPDAQVLLFRIAPGRAIPQHTHAGLEFTHVICGGFSD 178

Query: 169 ENGHYDVGDFMQHDGQICHSPSTPQDQDCLCL 200
            +GHY  GD ++ D ++ HSP    D +C+CL
Sbjct: 179 PDGHYGPGDLVECDAEVDHSPRVDDDGECICL 210