Pairwise Alignments

Query, 226 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 247 a.a., Transcriptional activator ChrR from Alteromonas macleodii MIT1002

 Score =  124 bits (312), Expect = 1e-33
 Identities = 78/242 (32%), Positives = 117/242 (48%), Gaps = 28/242 (11%)

Query: 3   YHPNYALLAAYAEGGLDSAHGLAISAHLEICPHCRDLVHEIEAELGELLNQQAASSV--A 60
           +HP+   L  + EG L  A  L +SAH ++C  C+  V EIE E    L  Q  S+V   
Sbjct: 4   FHPSAQQLKDFVEGTLSPAISLMVSAHCDMCEKCQRFV-EIETES---LAAQMVSNVNST 59

Query: 61  LSDDANWQAMF----DSIVALPQQAASNT----------PVKTTPVM--------VTVNG 98
            SD A     F      I  LP    +NT          PVK    +        + ++G
Sbjct: 60  ASDKAEMSLQFGDMLSQITQLPSSKQNNTLMEQPTAYREPVKKRAALRAQASVNTIELDG 119

Query: 99  KQIAIPKVLARLVKPEQQWRSYGGKVFSLPLQSEDNVRMNLMYISQGVSIPQHTHKGFES 158
           +   +P+ L R +     W S  GK++  P+   +    N +++  G S+P+HTH+G E 
Sbjct: 120 RVFTVPRTLHRYIDKTGNWSSLVGKLWQAPVDLGNQGVANFIFMGSGGSVPEHTHRGTEY 179

Query: 159 TLVLHGGFSDENGHYDVGDFMQHDGQICHSPSTPQDQDCLCLTVLTEPMVFTQGVARIFN 218
           TLV+ G FSD    YD GDF+  DG   H+P +   + CL  +++ +P+ FT G+AR+ N
Sbjct: 180 TLVIDGEFSDGLSRYDTGDFIFMDGDKTHTPKSEGKEGCLVFSIVDQPLHFTSGLARLLN 239

Query: 219 LF 220
            F
Sbjct: 240 PF 241