Pairwise Alignments

Query, 462 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 515 a.a., Muropeptide permease AmpG from Pseudomonas putida KT2440

 Score =  216 bits (549), Expect = 2e-60
 Identities = 150/498 (30%), Positives = 253/498 (50%), Gaps = 84/498 (16%)

Query: 9   SWLELIVSYFDRRLLWVFMLGCASGFPWVLIGSNMTGWLKDAGLSRAAIGYFGSVFAVYA 68
           +W   + +Y     L + +LG A+G P++L+ S ++ WL++AG++R  IGY   +   YA
Sbjct: 5   TWRAALAAYASPSTLVLLLLGFAAGLPYMLVFSTLSVWLREAGVARETIGYASLIGLAYA 64

Query: 69  INFLWAPLVDRVKLPILHSMLGQRRSWIFFCQSIVLVCTLLIAGVNPANNLMLTSMFALG 128
             ++W+PL+D+ +LP+L   LG+RRSW+   Q++V++  + ++  +P  +L      A+ 
Sbjct: 65  FKWVWSPLLDQWRLPLLGG-LGRRRSWLLLSQALVVIGLVGMSLCDPQQHLSWLIAMAVL 123

Query: 129 IAIASATQDVAVDAFRIDTFPKSESTKLPQASAMAVVGWWTGYSLPGYFAFVNA------ 182
           +A ASATQD+AVDA+R++           Q  A     +  GY +    A   A      
Sbjct: 124 VAFASATQDIAVDAYRLEIAD-------DQRQAALAASYMAGYRVAALLATAGALFFAEW 176

Query: 183 -DSIG-------WNGVYYIMAGVVGLLMLFTLLV-GEPHT-QRDQLQQ------------ 220
             S G       W G  Y+M GV+ L  LFT LV  EP    R QL              
Sbjct: 177 FGSTGFSYLHKAWAGT-YVMFGVMMLPALFTTLVMREPSVPMRTQLSAARYGLVHQMASV 235

Query: 221 ------------------------------------LAEERHQQVVSNPVLSWLTVT--- 241
                                               L +    +++   +LSW  ++   
Sbjct: 236 FVLIILLVSVPASFTQMFNTGWSSVISGDATPLDLLLEDRAFLRLILYVLLSWACLSSLG 295

Query: 242 ------VLEPFIDFFRRNGFRVALTLLLFVFLFKIGEAFLGRMSIAFYKEIGFSNEQIGY 295
                 VL P  DF  R  ++ AL LL  +  +++ +  +G M+  FY ++GF+ +QI  
Sbjct: 296 RRGLAPVLTPINDFITRYRWQ-ALLLLGLIATYRMSDTVMGVMANVFYIDMGFTKDQIAS 354

Query: 296 YSKLLGWGITILFTLLGSLVNIKFGIVRGLMIGGIAMASSNLMFAWIAKVGPNEHLFLAT 355
            SK+ G  +T++   +G L+ ++FGI+  L IGG+A A +N++F  +A +GPN  + + T
Sbjct: 355 VSKIFGLVMTLVGAGVGGLLIVRFGIMPILFIGGVASAGTNILFLMLADMGPNLEMLVVT 414

Query: 356 LFVDNFTSAFSTVAFVSFLTLMTGQAFSATQYALLASLGNLGRTTIASFSGELADFLNDW 415
           + +DNF+S  +T AFV++L+ +T   FSATQYALL+S+  L    I  +SG + +    +
Sbjct: 415 ISLDNFSSGMATSAFVAYLSSLTNLKFSATQYALLSSIMLLLPRLIGGYSGVIVEKFG-Y 473

Query: 416 SLFFILTAVMVIPSLIML 433
             FF++TA++ +P+LI++
Sbjct: 474 HDFFLITALLGVPTLILI 491