Pairwise Alignments

Query, 462 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 510 a.a., AmpG family muropeptide MFS transporter from Pseudomonas orientalis W4I3

 Score =  212 bits (540), Expect = 2e-59
 Identities = 145/493 (29%), Positives = 246/493 (49%), Gaps = 74/493 (15%)

Query: 9   SWLELIVSYFDRRLLWVFMLGCASGFPWVLIGSNMTGWLKDAGLSRAAIGYFGSVFAVYA 68
           +W   + +Y     L + +LG A+G P++L+ S ++ WL++AG++R  IGY   +   YA
Sbjct: 5   TWRAALAAYASPSTLVLLLLGFAAGLPYMLVFSTLSVWLREAGVARETIGYASLIGLAYA 64

Query: 69  INFLWAPLVDRVKLPILHSMLGQRRSWIFFCQSIVLVCTLLIAGVNPANNLMLTSMFALG 128
             ++W+PL+D+ +LP+L   LG+RRSW+   QS+V++  + +   +P  +L      A+ 
Sbjct: 65  FKWVWSPLLDQWRLPLL-GKLGRRRSWLVLAQSLVILGLIGMGFCDPQKHLSWLIAIAVV 123

Query: 129 IAIASATQDVAVDAFRIDTFPKSESTKLPQ--------ASAMAVVG---WWTGYSLPGYF 177
           +A ASATQD+AVDA+R++    S    L          A+ +A  G   +  G+   G+ 
Sbjct: 124 VAFASATQDIAVDAYRLEIADDSRQAALAASYMSGYRIAALLATAGALFFAEGFGSTGF- 182

Query: 178 AFVNADSIGWNGVYYIMAGVVGLLMLFTLLVGEPHTQ-RDQLQQLAEERHQQVVSNPVLS 236
              N     W G Y +   ++   +L TL + EP+   R QLQ        Q+VS  VL 
Sbjct: 183 ---NYKHSAWTGTYVLFGVLMVPALLTTLFMREPNVPLRTQLQAGRYSFMHQLVSVFVLI 239

Query: 237 WLTVTVLEPFIDFFR-----------------------------------------RNGF 255
            L V+V   F   +                                          R G 
Sbjct: 240 VLLVSVPAMFTQLYNTDFASVLFQGVSLWELLMEDRAFLRAILYILLTGLCLSAMGRRGL 299

Query: 256 RVALT---------------LLLFVFLFKIGEAFLGRMSIAFYKEIGFSNEQIGYYSKLL 300
              LT               LL  +  +++ +  +G M+  FY + GF+ +QI   SK+ 
Sbjct: 300 APVLTPVNDFILRYRWQALLLLGLIATYRMSDTVMGVMANVFYIDQGFTKDQIAGVSKIF 359

Query: 301 GWGITILFTLLGSLVNIKFGIVRGLMIGGIAMASSNLMFAWIAKVGPNEHLFLATLFVDN 360
           G  +T++   +G L+ ++FGI+  L IGG+A A +NL+F  +A +GP+  + + T+ +DN
Sbjct: 360 GLIMTLVGAGMGGLLIVRFGILPILFIGGVASAGTNLLFVMLADMGPDLQMLIVTISLDN 419

Query: 361 FTSAFSTVAFVSFLTLMTGQAFSATQYALLASLGNLGRTTIASFSGELADFLNDWSLFFI 420
           F+S  +T AFV++L+ +T   FSATQYALL+S+  L    I  +SG + +    +  FF+
Sbjct: 420 FSSGLATSAFVAYLSSLTNLKFSATQYALLSSIMLLLPRLIGGYSGVMVEKFG-YHNFFM 478

Query: 421 LTAVMVIPSLIML 433
           +T ++ +P+L ++
Sbjct: 479 ITCLLGVPTLFLI 491