Pairwise Alignments

Query, 462 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 510 a.a., AmpG family muropeptide MFS transporter from Pseudomonas fluorescens SBW25

 Score =  207 bits (527), Expect = 6e-58
 Identities = 146/498 (29%), Positives = 249/498 (50%), Gaps = 84/498 (16%)

Query: 9   SWLELIVSYFDRRLLWVFMLGCASGFPWVLIGSNMTGWLKDAGLSRAAIGYFGSVFAVYA 68
           +W   + +Y     L + +LG A+G P++L+ S ++ WL++AG++R  IGY   +   YA
Sbjct: 5   TWRAALAAYASPSTLVLLLLGFAAGLPYMLVFSTLSVWLREAGVARETIGYASLIGLAYA 64

Query: 69  INFLWAPLVDRVKLPILHSMLGQRRSWIFFCQSIVLVCTLLIAGVNPANNLMLTSMFALG 128
             ++W+PL+D+ +LP+L   LG+RRSW+   QS+V++  + +   +P  +L      A+ 
Sbjct: 65  FKWVWSPLLDQWRLPLL-GKLGRRRSWLVLAQSLVILGLIGMGFCDPQKHLSWLIAIAVV 123

Query: 129 IAIASATQDVAVDAFRIDTFPKSESTKLPQ--------ASAMAVVG---WWTGYSLPGYF 177
           +A ASATQD+AVDA+R++    S    L          A+ +A  G   +  G+   G+ 
Sbjct: 124 VAFASATQDIAVDAYRLEIADDSRQAALAASYMSGYRIAALLATAGALFFAEGFGSTGF- 182

Query: 178 AFVNADSIGWNGVYYIM--------------------------AG-------VVGLLMLF 204
              N     W G Y +                           AG       +V + +L 
Sbjct: 183 ---NYKHSAWTGTYVLFGVLMIPALLTTLFMREPNVPLRTQLQAGRYSFVHQLVSVFVLI 239

Query: 205 TLLVGEPHTQRDQLQQLAEERHQQVVSNPVLSW---------------LTVT-------- 241
            LLV  P        QL       V+ + +  W               +T+T        
Sbjct: 240 VLLVSVPA----MFTQLFNTDFASVLFHGMSLWDLLMEDRAFLRAILYITLTALCLSAMG 295

Query: 242 ------VLEPFIDFFRRNGFRVALTLLLFVFLFKIGEAFLGRMSIAFYKEIGFSNEQIGY 295
                 VL P  DF  R  ++ AL LL  +  +++ +  +G M+  FY + GF+ +QI  
Sbjct: 296 RRGLAPVLTPVNDFILRYRWQ-ALLLLGLIATYRMSDTVMGVMANVFYIDQGFTKDQIAG 354

Query: 296 YSKLLGWGITILFTLLGSLVNIKFGIVRGLMIGGIAMASSNLMFAWIAKVGPNEHLFLAT 355
            SK+ G  +T++   +G L+ ++FGI+  L IGGIA A +NL+F  +A +GP+  + + T
Sbjct: 355 VSKIFGLIMTLVGAGMGGLLIVRFGILPILFIGGIASAGTNLLFVMLADMGPDLQMLIFT 414

Query: 356 LFVDNFTSAFSTVAFVSFLTLMTGQAFSATQYALLASLGNLGRTTIASFSGELADFLNDW 415
           + +DNF+S  +T AFV++L+ +T   FSATQYALL+S+  L    I  +SG + +    +
Sbjct: 415 ISLDNFSSGLATSAFVAYLSSLTNLKFSATQYALLSSIMLLLPRLIGGYSGVMVEKFG-Y 473

Query: 416 SLFFILTAVMVIPSLIML 433
             FF++T ++ +P+L+++
Sbjct: 474 HNFFLITCMLGVPTLLLI 491