Pairwise Alignments

Query, 462 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 448 a.a., muropeptide transporter from Alteromonas macleodii MIT1002

 Score =  443 bits (1140), Expect = e-129
 Identities = 226/442 (51%), Positives = 303/442 (68%), Gaps = 9/442 (2%)

Query: 5   PRSHSWLELIVSYFDRRLLWVFMLGCASGFPWVLIGSNMTGWLKDAGLSRAAIGYFGSVF 64
           P++   L  + ++ D+R L +F+ G +SGFPW++IGS ++ WLKD GLSR+AIG FG +F
Sbjct: 10  PKAAVLLNALKTFNDKRYLSIFLFGISSGFPWIMIGSVLSAWLKDEGLSRSAIGLFGIIF 69

Query: 65  AVYAINFLWAPLVDRVKLPILHSMLGQRRSWIFFCQSIVLVCTLLIAGVNPANNLMLTSM 124
           A Y+ NFLW+PLVD++K P+L    GQRR WIF  Q  V++  L+++ +    +L   ++
Sbjct: 70  ATYSFNFLWSPLVDKIKPPLL----GQRRGWIFAMQCCVVLLCLVMSQLTADQDLFYVAL 125

Query: 125 FALGIAIASATQDVAVDAFRIDTFPKSESTKLPQASAMAVVGWWTGYSLPGYFAFVNADS 184
             L IAIASATQD+A+D FRID   + +   +  AS++A  GWWTGY   G   F  AD 
Sbjct: 126 VGLLIAIASATQDIAIDGFRIDCIAQDDKDGMSAASSVATAGWWTGYGGLGAIPFFLADM 185

Query: 185 IGWN--GVYYIMAGVVGLLMLFTLLVGEPHTQRDQLQQLAEERHQQVVSNPVLSWLTVTV 242
             W    +Y ++  ++ LLM  T L  EP   R+ L  L +   +    +PV  W+  T+
Sbjct: 186 TSWTWPNIYLLLGALMALLMCATYLANEPQIDREAL--LEKITAKDTKQSPVFHWIQTTL 243

Query: 243 LEPFIDFFRRNGFRVALTLLLFVFLFKIGEAFLGRMSIAFYKEIGFSNEQIGYYSKLLGW 302
           + PF +FF RNG ++A + LLF+FLFKIGEAFLGRMSI FYKEIGFSN  I  YSKLL W
Sbjct: 244 VTPFAEFFNRNGVKLAASFLLFIFLFKIGEAFLGRMSIVFYKEIGFSNSDIATYSKLLNW 303

Query: 303 GITILFTLLGSLVNIKFGIVRGLMIGGIAMASSNLMFAWIAKVGPNEHLFLATLFVDNFT 362
            +TI+F+LLG LVNI++GI RGLMI G+AMA+SNL+FA IA+ GP+  L   T+ VD FT
Sbjct: 304 WVTIVFSLLGGLVNIRYGIYRGLMIAGVAMAASNLLFALIAQTGPSTSLLAITVIVDGFT 363

Query: 363 SAFSTVAFVSFLTLMTGQAFSATQYALLASLGNLGRTTIASFSGELADFL-NDWSLFFIL 421
            A+STVA V+F++L+  +AFSATQYAL+ASL   GRT +AS SG + D L  +WSLFFIL
Sbjct: 364 GAWSTVAMVAFISLLCNRAFSATQYALMASLSVAGRTLVASSSGFVVDSLEGNWSLFFIL 423

Query: 422 TAVMVIPSLIMLYSLRHDFTKM 443
           TAVMVIPSL  LYS+RH   ++
Sbjct: 424 TAVMVIPSLCFLYSIRHHIKRV 445