Pairwise Alignments

Query, 376 a.a., ribosomal RNA large subunit methyltransferase G from Vibrio cholerae E7946 ATCC 55056

Subject, 340 a.a., Ribosomal RNA small subunit methyltransferase C from Azospirillum sp. SherDot2

 Score = 61.2 bits (147), Expect = 4e-14
 Identities = 60/260 (23%), Positives = 106/260 (40%), Gaps = 17/260 (6%)

Query: 105 PNDASVVLLQLPKSNRHLVWILSQLRKALSPNIPIIAVNKAKEIHTSTLNLFEKHLGPTT 164
           P D +V  L+LP+        L  L   L+P  P+       E  TS     +       
Sbjct: 74  PFDGAV--LRLPRGWAGFEMALHALASRLAPGAPLWIAGGNDEGVTSAAKHLDGLTEEPE 131

Query: 165 TSLAWKKHRLVFSSATVNPANEVNPECGW------SIEPYAITLTNLPNVYSGESLDLGS 218
           T +  ++ RL+ +  T  PA     +  W      ++    + L + P +++   LD G+
Sbjct: 132 TLIIKRRARLLLTQRTDAPAKGALED--WRQTVTLTLPDRTLELVSYPGLFAHGHLDAGT 189

Query: 219 RFILEHLPADPTLEDFIDLGCGNGVLSVRLGQLNPQAKITCVDESFMAIASAQKNLHDNL 278
             +L+ LP        +D GCG GV++  + +  P A +T +D   +A+ +A++N+    
Sbjct: 190 ECLLKVLPEVAAGTRVLDFGCGAGVIARAVRERQPDAPLTLLDIDAVALHAARQNV---- 245

Query: 279 GKRDIHCIANNCLDGFPAHSS-SMIVCNPPFHQQQTITDHIAWQMFCDSKHVLKKGGKLW 337
              D   + ++ L G        +I+ NPP H+ +     +   +   +K  LK  G L 
Sbjct: 246 --PDAELVLSDGLAGLGTRERFGLILSNPPLHRGKDEDFGMLDALVAGTKQYLKLRGTLV 303

Query: 338 VIGNRHLGYDVKLARLFGKS 357
            +  R  G        FG S
Sbjct: 304 AVTQRTAGVGKLFKAAFGHS 323