Pairwise Alignments

Query, 446 a.a., NADH:ubiquinone reductase (Na(+)-transporting) subunit A from Vibrio cholerae E7946 ATCC 55056

Subject, 459 a.a., Na(+)-translocating NADH-quinone reductase subunit A from Alteromonas macleodii MIT1002

 Score =  588 bits (1516), Expect = e-172
 Identities = 289/446 (64%), Positives = 348/446 (78%)

Query: 1   MITIKKGLDLPIAGTPSQVISDGKAIKKVALLGEEYVGMRPTMHVRVGDEVKKAQILFED 60
           MI IKKGLDLPI G P Q I+D  A  +VA+LGEEYVGMRPTMHV+VGD VKK Q+LFED
Sbjct: 14  MIKIKKGLDLPIEGAPKQEIADASAATRVAILGEEYVGMRPTMHVQVGDVVKKGQVLFED 73

Query: 61  KKNPGVKFTSPVSGKVVEINRGAKRVLQSVVIEVAGDDQVTFDKFEANQLASLNRDAIKT 120
           KKNPGVKFT+P +G+VVE+NRGAKRVLQSVVI+  G D VTFDK  A+Q+AS  R+ +++
Sbjct: 74  KKNPGVKFTAPAAGEVVEVNRGAKRVLQSVVIKTNGSDAVTFDKIAADQIASATREQLQS 133

Query: 121 QLVESGLWTAFRTRPFSKVPAIDSTSEAIFVTAMDTNPLAAEPTVVINEQSEAFVAGLDV 180
            LVESG+WTAFRTRPFSK P +DS   +IFVTAMDTNPLAA+P V+I E+ + FV GL  
Sbjct: 134 ILVESGMWTAFRTRPFSKSPKLDSVPSSIFVTAMDTNPLAADPAVIIAERQDDFVNGLKA 193

Query: 181 LSALTTGKVYVCKKGTSLPRSQQPNVEEHVFDGPHPAGLAGTHMHFLYPVSADHVAWSIN 240
           L+ L+ GK YVCK   +   +    V+   F GPHPAGL GTH+HFL     +   W IN
Sbjct: 194 LTQLSGGKTYVCKAAGASVATGDAAVDVEEFGGPHPAGLPGTHIHFLDSAGMNKTVWHIN 253

Query: 241 YQDVIAVGQLFLTGELYTQRVVSLAGPVVNKPRLVRTVMGASLEQLVDSEIMPGEVRIIS 300
           YQDV+A+G L  +GEL  +RV+SLAGP    PRLVRTVMGA L +L  SE + GEVR+IS
Sbjct: 254 YQDVMAIGALLTSGELDNRRVISLAGPAATNPRLVRTVMGADLTELTASEQVDGEVRVIS 313

Query: 301 GSVLSGTKATGPHAYLGRYHLQVSVLREGRDKELFGWAMPGKNKFSVTRSFLGHLFKGQV 360
           GSVLSGT A G H +LGR+H QVS+L+EGR+K+LFGW +PG N+ SVTR++LGHL  G+ 
Sbjct: 314 GSVLSGTTAMGVHGFLGRFHTQVSLLKEGREKKLFGWILPGSNQHSVTRAYLGHLSGGKK 373

Query: 361 YNMTTTTNGSDRSMVPIGNYEKVMPLDMEPTLLLRDLCAGDSDSAVRLGALELDEEDLAL 420
           ++MTTTTNGS+RSMVPIGNYE+VMPLD+ PTLLLRDL +GD+D A  LG LELDEEDLAL
Sbjct: 374 FDMTTTTNGSERSMVPIGNYERVMPLDIIPTLLLRDLISGDTDGAQTLGCLELDEEDLAL 433

Query: 421 CTFVCPGKYEYGQLLRECLDKIEKEG 446
           CT+VCPGKY Y  +LR+CL  IEKEG
Sbjct: 434 CTYVCPGKYNYAPILRDCLTTIEKEG 459