Pairwise Alignments

Query, 415 a.a., NADH:ubiquinone reductase (Na(+)-transporting) subunit B from Vibrio cholerae E7946 ATCC 55056

Subject, 358 a.a., electron transporter RnfD from Magnetospirillum magneticum AMB-1

 Score =  114 bits (286), Expect = 4e-30
 Identities = 77/262 (29%), Positives = 123/262 (46%), Gaps = 32/262 (12%)

Query: 161 VTSILFALIVPPTLPLWQAALGITFGVVVAKEVFGGTGRNFLNPALAGRAFLFFAYPAQI 220
           +T  L AL +PP  P W A +   F V +AK  FGG G+N  NPA+ GR  +  ++P Q+
Sbjct: 81  ITGWLLALSLPPWAPWWVAVVASVFAVCLAKHAFGGLGQNVFNPAMVGRVVVLVSFPLQM 140

Query: 221 SG-----------------DLVWT-----AADGYSGATALS-QWAQGGAGALINNATGQT 257
           +                   L  T       DG S A+ L     +   G  +  +    
Sbjct: 141 TSFVTPKPLFTPGSPGLAESLTITFGRGFTLDGISTASPLGFIKTELSKGVPVTQSLSSF 200

Query: 258 ITWMDAFIGNIPGSIGEVSTLALMIGAAFIVYMGIASWRIIGGVMIGMILLSTLFNVI-- 315
            +  D  IG  PGS+GE +   +++G  F+++  I SW I   ++  + L+ T+F+ +  
Sbjct: 201 PSLGDMMIGFHPGSMGETAVPLILLGGLFLMWRKIISWHIPVSMLATLFLMGTIFSTLDP 260

Query: 316 GSDTNAMFNMPWHWHLVLGGFAFGMFFMATDPVSASFTNSGKWAYGILIGVMCVLIRVVN 375
              T+ M        L+ G    G FF+ATD V++  + SG+ A+G  +G++  +IR   
Sbjct: 261 ARHTSGMV------QLLSGASFLGAFFIATDYVTSPVSKSGQLAFGFGVGLLTWIIRTY- 313

Query: 376 PAYPEGMMLAILFANLFAPLFD 397
             YPEG+  A+L  N   P+ D
Sbjct: 314 AGYPEGVAFAVLLMNALTPILD 335