Pairwise Alignments

Query, 415 a.a., NADH:ubiquinone reductase (Na(+)-transporting) subunit B from Vibrio cholerae E7946 ATCC 55056

Subject, 400 a.a., NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  353 bits (905), Expect = e-102
 Identities = 194/427 (45%), Positives = 252/427 (59%), Gaps = 51/427 (11%)

Query: 5   KFLEDI----EHHFEPGGKHEKWFALYEAAATLFYTPGLVTK-RSSHVRDSVDLKRIMIM 59
           KFL D+    +  F+ GGK E  + LYEA  T  ++P   T  + + V+D++DLKR+MI 
Sbjct: 2   KFLRDLLDKQKPLFQKGGKFENLYYLYEAGETFMFSPNHTTGIKGAQVKDAIDLKRMMIT 61

Query: 60  VWLAVFPAMFWGMYNAGGQAIAALNHLYSGDQLAAIVAGNWHYWLTEMLGGTMSSDAGWG 119
           V +A+ P + +G+YN G Q   A+                                 G+G
Sbjct: 62  VVVALLPCLLFGIYNVGEQHFLAVGE-----------------------------SVGFG 92

Query: 120 SKMLLGATYFLPIYATVFIVGGFWEVLFCMVRKHEVNEGFFVTSILFALIVPPTLPLWQA 179
            K LLG    LPI    +  GG  E +F ++RKH +NEGF VT +L  L+VP T+PLWQ 
Sbjct: 93  EKFLLGLKLVLPIVIVAYAAGGIVEAIFAVIRKHPINEGFLVTGMLVPLVVPATMPLWQV 152

Query: 180 ALGITFGVVVAKEVFGGTGRNFLNPALAGRAFLFFAYPAQISGDLVW------TAADGYS 233
           AL   F VV+AKEVFGGTG N LN A+  RAFL+FAYPAQISGD VW      TA DG+S
Sbjct: 153 ALATIFAVVIAKEVFGGTGMNILNVAMTARAFLYFAYPAQISGDQVWTYLGEKTAVDGFS 212

Query: 234 GATALS-QWAQGGAGALINNATG--------QTITWMDAFIGNIPGSIGEVSTLALMIGA 284
           GATALS  +  G +G  + +A          Q  ++ + F G IPGSIGE S L  +IGA
Sbjct: 213 GATALSVAYGAGQSGEAVTSALATHNAAIGDQLYSFANMFFGFIPGSIGETSALMCLIGA 272

Query: 285 AFIVYMGIASWRIIGGVMIGMILLSTLFNVIGSDTNAMFNMPWHWHLVLGGFAFGMFFMA 344
             ++  G+ SW+II     G  ++  + N   +  N    MP H+HLV+GG AFG+ FMA
Sbjct: 273 LILIATGVGSWKIIVSGFAGTYIMGLIMNAFAA--NEFMAMPAHYHLVMGGVAFGIVFMA 330

Query: 345 TDPVSASFTNSGKWAYGILIGVMCVLIRVVNPAYPEGMMLAILFANLFAPLFDHVVVERN 404
           TDPVSAS T  GKW YG+LIG + V+IRV NPAYPEG+MLA+L  N+FAPL D+ VV+ N
Sbjct: 331 TDPVSASQTEKGKWLYGLLIGFLTVIIRVTNPAYPEGIMLAVLLMNVFAPLIDYYVVKAN 390

Query: 405 IKRRLAR 411
            KRRL R
Sbjct: 391 KKRRLQR 397