Pairwise Alignments

Query, 210 a.a., NADH:ubiquinone reductase (Na(+)-transporting) subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 230 a.a., Electron transport complex protein RnfE from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  126 bits (316), Expect = 4e-34
 Identities = 77/202 (38%), Positives = 111/202 (54%), Gaps = 16/202 (7%)

Query: 6   ELKKSVLAPVLDNNPIALQVLGVCSALAVTTKLETAFVMTLAVMFVTALSNFFVSLIRNH 65
           E+K  V+  +  NN   +Q+LG+C  LAVT+    A  + LA   V  L+N  VS +R  
Sbjct: 3   EIKDIVVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTVSALRRW 62

Query: 66  IPNSVRIIVQMAIIASLVIVVDQILKAYLYDISKQLSVFVGLIITNCIVMGRAEAFAMKS 125
            P  +RI + + IIAS+V  V  ++ AY + + + L +F+ LI+TNCIV+GRAEAFA K 
Sbjct: 63  TPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKK 122

Query: 126 EPIPSFIDGIGNGLGYGFVLMTVGFFRELLGSGKLF-GLEVLPLISNGGWYQ-------- 176
            P  S +DG   G+G    +  +G  RE+LG+G LF G + L     GGW +        
Sbjct: 123 GPWLSALDGFSIGMGATGAMFVLGSLREILGNGTLFDGADSL----LGGWAKVLRVEIFH 178

Query: 177 ---PNGLMLLAPSAFFLIGFMI 195
              P  L +L P AF  +G M+
Sbjct: 179 TDSPFLLAMLPPGAFIGLGLML 200