Pairwise Alignments

Query, 408 a.a., NADH:ubiquinone reductase (Na(+)-transporting) subunit F from Vibrio cholerae E7946 ATCC 55056

Subject, 329 a.a., CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase from Pseudomonas simiae WCS417

 Score = 73.6 bits (179), Expect = 8e-18
 Identities = 80/371 (21%), Positives = 144/371 (38%), Gaps = 64/371 (17%)

Query: 45  KAIVTQPGGKLLTALAGAGVFVSSACGGGGSCGQCRVKIKSGGGDILPTELDHISKGEAR 104
           K+   + G  LL      G  +  +C  G  CG C+  +  G  +++  EL  ++  E  
Sbjct: 10  KSFTGESGKSLLECAKSQGTVLEYSCRTG-RCGVCKANVLQGDTEVMQPELA-LTDEERA 67

Query: 105 EGERLACQVAVKADMDLELPE----EIFGVKKWECTVISNDNKATFIKELKLAIPDGESV 160
            G  L C  A   D++L++ +        +K   C + + +  A  +  + L  P   ++
Sbjct: 68  NGAILTCCRAALTDVELDIEDLGLLADIQIKTMPCRLDTLERLADDVVRVVLRTPPKSAL 127

Query: 161 PFRAGGYIQIEAPAHHVKYADFDVPEKYRGDWDKFNLFRYESKVDEPIIRAYSMANYPEE 220
            +  G YI +                                   + + R+YS+AN   E
Sbjct: 128 FYLPGQYIDVIGK--------------------------------DGVRRSYSIANAVRE 155

Query: 221 FGIIMLNVRIATPPPNNPNVPPGQMSSYIWS-LKAGDKCTISGPFGEFFAKDTDA-EMVF 278
              + L++R          VP G MS Y +   +  D   + GP G F  ++     +VF
Sbjct: 156 DAKLELHIR---------QVPDGVMSQYWFGEAQVNDLLRLEGPLGTFCLRNASTTNLVF 206

Query: 279 IGGGAGMAPMRSHI---FDQLKRLKSKRKMSYWYGARSKREMFYVEDFDGLAAENDNFVW 335
           +  G G+AP+++ +       + L  KR   YW G R++ +++++ DF  L        +
Sbjct: 207 MATGTGIAPVKAMLEALASTSEPLIGKRVYVYW-GGRTENDLYWLPDFPTL-----GMTY 260

Query: 336 HCALSDPQPEDNWTGYTGFIHNVLYENYLKDHEAPEDCEYYMCGPPMMNAAVINMLKNLG 395
              LS  +   +W G TG++   +    L ++    D   Y CG   M      ML   G
Sbjct: 261 RPVLS--RAGKHWPGATGYVQQAV----LAENLDLADTSVYACGSEAMIHTAREMLTQAG 314

Query: 396 VEEENILLDDF 406
           +  ++   D F
Sbjct: 315 LPLKHFHSDAF 325