Pairwise Alignments

Query, 408 a.a., NADH:ubiquinone reductase (Na(+)-transporting) subunit F from Vibrio cholerae E7946 ATCC 55056

Subject, 338 a.a., oxidoreductase FAD/NAD(P)-binding domain protein from Variovorax sp. SCN45

 Score = 87.0 bits (214), Expect = 7e-22
 Identities = 92/383 (24%), Positives = 149/383 (38%), Gaps = 58/383 (15%)

Query: 29  LVPTGDITISINGDPEKAIVTQPGGKLLTALAGAGVFVSSACGGGGSCGQCRVKIKSGGG 88
           L+P   +T+       + +    GG L+ A   AG+ + + C  G  CG C  ++ SG  
Sbjct: 8   LIPLIPVTLLFADGVSQRVSVPRGGNLVEAATEAGLNLLTDCSNG-QCGTCTAQLVSGTV 66

Query: 89  DILPTELDHISKGEAREGERLACQVAVKADMDLELPEEIFGVKKWE-----CTVISNDNK 143
           ++   +   +   +   G  L C   V     +ELP +       E       V + +  
Sbjct: 67  ELDEYDRAVLPDDDRASGTVLPCVCRVSTPCAIELPYDSTEALSEEPEPIPAEVTAVEQV 126

Query: 144 ATFIKELKLAIPDGESVPFRAGGYIQIEAPAHHVKYADFDVPEKYRGDWDKFNLFRYESK 203
           AT I  L++ +P  E V F  G Y++I AP    K A F                     
Sbjct: 127 ATEIVRLEVQVP--EVVVFEPGQYVRI-AP----KGATFH-------------------- 159

Query: 204 VDEPIIRAYSMANYPEEFGIIMLNVRIATPPPNNPNVPPGQMSSYIWSLKAGDKCTISGP 263
                 R+YSMAN P     +   VR+         V  G  S ++   K GD   +S P
Sbjct: 160 ------RSYSMANVPGT-DRLQFFVRL---------VEGGAFSDWLAIAKVGDMVDLSAP 203

Query: 264 FGEFFAKDTDAEMVFIGGGAGMAPMRSHIFDQLKRLKSKRKMSYWYGARSKREMFYVEDF 323
            G FF +D D   +F+ GG G+AP  S +   +    +KR  ++  GAR+   +F +E+ 
Sbjct: 204 HGTFFLRDEDRPRLFVAGGTGVAPFLSMLRSMIDNPHAKR-TTFVIGARTPGHLFAMEEL 262

Query: 324 DGLAAENDNFVWHCALSDPQPEDNWTGYTGFIHNVLYENYLKDHEAPEDCEYYMCGPPMM 383
             L    ++     A+     +   TGY          + +           Y+CGPP M
Sbjct: 263 KSLRERLEDVDLQIAVEQDAQDGCHTGYP--------TDLITKLGLDPTTRVYLCGPPPM 314

Query: 384 NAAVINMLKNLGVEEENILLDDF 406
             A     +  G++  ++L + F
Sbjct: 315 VEAGRRAAEAAGLKRADVLCERF 337