Pairwise Alignments

Query, 408 a.a., NADH:ubiquinone reductase (Na(+)-transporting) subunit F from Vibrio cholerae E7946 ATCC 55056

Subject, 331 a.a., oxidoreductase FAD/NAD(P)-binding domain protein from Variovorax sp. SCN45

 Score = 82.8 bits (203), Expect = 1e-20
 Identities = 87/360 (24%), Positives = 143/360 (39%), Gaps = 58/360 (16%)

Query: 52  GGKLLTALAGAGVFVSSACGGGGSCGQCRVKIKSGGGDILPTELDHISKGEAREGERLAC 111
           G KL+ A   AG+ + + C  G  CG C  ++ SG  D+   +   +   +   G  L C
Sbjct: 24  GQKLVEAAGQAGLHLLTDCSNG-RCGTCTARLLSGAIDMGDYDTSVLPDDDRDAGGVLPC 82

Query: 112 QVAVKADMDLELPEEIFGV-----KKWECTVISNDNKATFIKELKLAIPDGESVPFRAGG 166
              V     +E P E   V           V++    A+    L+++I  G  V F  G 
Sbjct: 83  VCRVAGACAVEFPYESAEVLADVPPPIAGRVVAVRRIASETVLLQISIAKG--VQFEPGQ 140

Query: 167 YIQIEAPAHHVKYADFDVPEKYRGDWDKFNLFRYESKVDEPIIRAYSMANYPEEFGIIML 226
           Y++I+             PE                     I R+YSMAN P    +   
Sbjct: 141 YVRIQ-------------PE------------------GTDISRSYSMANVPGSNALEFF 169

Query: 227 NVRIATPPPNNPNVPPGQMSSYIWSLKAGDKCTISGPFGEFFAKDTDAEMVFIGGGAGMA 286
            VR+         VP G  S+++ S KAGD+  +S P G FF +D +   +F+ GG G+A
Sbjct: 170 -VRL---------VPDGAFSNWLASAKAGDQVQLSSPHGTFFLRDEERPRLFVAGGTGVA 219

Query: 287 PMRSHIFDQLKRLKSKRKMSYWYGARSKREMFYVEDFDGLAAENDNFVWHCALSDPQPED 346
           P  S +    ++ ++ +  +   GAR+   +F +E+ + L   + N     A+      D
Sbjct: 220 PFLSMLRAMSQKARA-QPTTLLIGARTHGHLFALEELETLRQASPNIQVRLAVEQDADGD 278

Query: 347 NWTGYTGFIHNVLYENYLKDHEAPEDCEYYMCGPPMMNAAVINMLKNLGVEEENILLDDF 406
              GY          + +           Y+CGPP M  A     +  G+  +++L + F
Sbjct: 279 CHHGYA--------TDLIAGLGLDPATRVYLCGPPPMVEAGRKAAEAAGLPRQDVLCERF 330