Pairwise Alignments

Query, 408 a.a., NADH:ubiquinone reductase (Na(+)-transporting) subunit F from Vibrio cholerae E7946 ATCC 55056

Subject, 329 a.a., Probable ferredoxin oxidoreductase oxidoreductase protein (EC 1.-.-.- ) from Variovorax sp. SCN45

 Score = 64.3 bits (155), Expect = 5e-15
 Identities = 86/370 (23%), Positives = 146/370 (39%), Gaps = 63/370 (17%)

Query: 45  KAIVTQPGGKLLTALAGAGVFVSSACGGGGSCGQCRVKIKSGGGDILPTELDHISKGEAR 104
           + +  +PG  LL  L    V VS +C  G  CG CR K+ SG   +L    D I      
Sbjct: 10  RTLEVRPGANLLEVLREHHVPVSYSCMSG-RCGTCRCKVVSG--QVLDGGQDAIRPDGQG 66

Query: 105 EGERLACQVAVKADMDLELPEE----IFGVKKWECTVISNDNKATFIKELKLAIPDGESV 160
           E   LACQ  +     +E+PE     +   +  + TV   D     I+ L+L     + +
Sbjct: 67  ERYVLACQSTLTESCAIEIPEPDEVVVHPARILKATVTGIDELTHDIRRLRL--KPNKPL 124

Query: 161 PFRAGGYIQIE-APAHHVKYADFDVPEKYRGDWDKFNLFRYESKVDEPIIRAYSMANYPE 219
            F  G Y Q++ AP                                  + R YSMA    
Sbjct: 125 EFSPGQYAQLQFAP---------------------------------DLARPYSMAGLSR 151

Query: 220 EFGIIMLNVRIATPPPNNPNVPPGQMSSYIW-SLKAGDKCTISGPFGEFFAKDTD-AEMV 277
           +   +  +VR          VP G+++++I+  L+ GD   +SGP G  + +      M+
Sbjct: 152 D-AELEFHVR---------RVPGGRVTAHIFEQLRVGDSVRVSGPLGTAYLRTKHRGPML 201

Query: 278 FIGGGAGMAPMRSHIFDQLKRLKSKRKMSYWYGARSKREMFYVEDFDGLAAENDNFVWH- 336
              GG G+AP+ S +   +      + +  + G RS  +++ + +   L A +     H 
Sbjct: 202 CAAGGTGLAPILSIVRGAI-ATGLTQPIHLYLGVRSDADVYGLHELRELQALHPGLNVHV 260

Query: 337 CALSDPQPEDNWTGYTGFIHNVLYENYLKDHEAPEDCEYYMCGPPMMNAAVINMLKNLGV 396
             ++ P    N +   G I + +  ++     + +    Y+CG P M  AV  +++  G+
Sbjct: 261 VVVTGPA---NGSRRVGLITDAIRADW---PGSLDGWRAYLCGSPPMVEAVTQLVRGRGL 314

Query: 397 EEENILLDDF 406
             E    D F
Sbjct: 315 APEQTHADAF 324