Pairwise Alignments

Query, 408 a.a., NADH:ubiquinone reductase (Na(+)-transporting) subunit F from Vibrio cholerae E7946 ATCC 55056

Subject, 605 a.a., flavodoxin from Vibrio cholerae E7946 ATCC 55056

 Score = 50.4 bits (119), Expect = 1e-10
 Identities = 47/207 (22%), Positives = 93/207 (44%), Gaps = 24/207 (11%)

Query: 206 EPIIRAYSMANYPEEFGIIMLNVRIATPPPNNPNVPPGQMSSYIW-SLKAGDKCTISGPF 264
           EP+ R Y++++ P   G + ++V+          +  G++S+++  +L+ G   T   P 
Sbjct: 324 EPVQRYYTLSSSPSRPGRLAISVK---------RIDGGRVSNWLQENLQIGTTLTAQHPT 374

Query: 265 GEFFAKDTDAE-MVFIGGGAGMAPMRSHIFDQLKRLKSKRKMS---YWYGARSKREMFYV 320
           G F    T  + ++ +  G+G+ PM S     L+ L    ++    +++  RS++++   
Sbjct: 375 GHFHLDTTALQPLLLLSAGSGVTPMLS----MLRYLADHNQLDDVVFYHQCRSEQDIPCQ 430

Query: 321 EDFDGLAAENDNFVWHCALSDPQPEDNWTGYTGFIHNVLYENYLKDHEAPEDCEYYMCGP 380
            + D LA ++       AL+ P P+  W G  G     L  +++K        + ++CGP
Sbjct: 431 AELDALAKQHAGLTLIYALTQPSPQ--WQGEQGR----LSLSHIKRIPNLVSRQVFVCGP 484

Query: 381 PMMNAAVINMLKNLGVEEENILLDDFG 407
                   N+L   GV E     + FG
Sbjct: 485 DGFMQKAKNLLLKQGVAESAYHQEAFG 511



 Score = 40.0 bits (92), Expect = 2e-07
 Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 10/90 (11%)

Query: 35  ITISINGDPEKAIVTQPGGKLLTALAGAGVFVSSACGGGGSCGQCRVKIKSGGGDI--LP 92
           +T+S NG    A   +    LL     AGV + ++C  G  CG C+VK+KSG  +   +P
Sbjct: 523 VTLSFNGIQVSADNQKT---LLEHAEDAGVRIPNSCRAG-ICGACKVKVKSGLVEQPKVP 578

Query: 93  TELDHISKGEAREGERLACQVAVKADMDLE 122
             +DH    E   G  LAC      D+D+E
Sbjct: 579 ALMDH----ERSMGMALACCSVANTDLDVE 604